Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.15■□□□□ 0.66
Rfx3P48381 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rfx3P48381 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx3P48381 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rfx3P48381 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx3P48381 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx3P48381 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rfx3P48381 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx3P48381 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx3P48381 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Rfx3P48381 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx3P48381 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rfx3P48381 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rfx3P48381 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.13■□□□□ 0.65
Rfx3P48381 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx3P48381 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rfx3P48381 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx3P48381 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx3P48381 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx3P48381 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx3P48381 Gm11175-201ENSMUST00000116172 543 ntBASIC19.12■□□□□ 0.65
Rfx3P48381 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx3P48381 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx3P48381 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx3P48381 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rfx3P48381 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx3P48381 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Rfx3P48381 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.11■□□□□ 0.65
Rfx3P48381 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.11■□□□□ 0.65
Rfx3P48381 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx3P48381 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx3P48381 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx3P48381 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx3P48381 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx3P48381 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx3P48381 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx3P48381 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.1■□□□□ 0.65
Rfx3P48381 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.1■□□□□ 0.65
Rfx3P48381 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx3P48381 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx3P48381 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx3P48381 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx3P48381 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx3P48381 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx3P48381 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx3P48381 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rfx3P48381 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx3P48381 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx3P48381 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.08■□□□□ 0.64
Rfx3P48381 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx3P48381 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx3P48381 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.08■□□□□ 0.64
Rfx3P48381 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx3P48381 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx3P48381 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx3P48381 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx3P48381 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx3P48381 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.07■□□□□ 0.64
Rfx3P48381 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx3P48381 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx3P48381 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx3P48381 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.06■□□□□ 0.64
Rfx3P48381 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx3P48381 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Rfx3P48381 Gm27502-201ENSMUST00000183495 199 ntBASIC19.06■□□□□ 0.64
Rfx3P48381 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.06■□□□□ 0.64
Rfx3P48381 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx3P48381 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx3P48381 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx3P48381 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx3P48381 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx3P48381 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.05■□□□□ 0.64
Rfx3P48381 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx3P48381 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rfx3P48381 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx3P48381 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx3P48381 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.04■□□□□ 0.64
Rfx3P48381 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx3P48381 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.04■□□□□ 0.64
Rfx3P48381 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.04■□□□□ 0.64
Rfx3P48381 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx3P48381 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx3P48381 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx3P48381 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Rfx3P48381 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx3P48381 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rfx3P48381 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.04■□□□□ 0.64
Rfx3P48381 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx3P48381 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx3P48381 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.03■□□□□ 0.64
Rfx3P48381 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rfx3P48381 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.03■□□□□ 0.64
Rfx3P48381 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx3P48381 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Rfx3P48381 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.03■□□□□ 0.64
Rfx3P48381 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx3P48381 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx3P48381 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rfx3P48381 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx3P48381 Gm14523-201ENSMUST00000117260 558 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms