Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox18P43680 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox18P43680 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox18P43680 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sox18P43680 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox18P43680 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox18P43680 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox18P43680 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Sox18P43680 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox18P43680 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox18P43680 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.48■□□□□ 0.87
Sox18P43680 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox18P43680 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox18P43680 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox18P43680 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.47■□□□□ 0.87
Sox18P43680 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox18P43680 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Sox18P43680 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Sox18P43680 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.47■□□□□ 0.87
Sox18P43680 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.47■□□□□ 0.87
Sox18P43680 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.47■□□□□ 0.87
Sox18P43680 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.47■□□□□ 0.87
Sox18P43680 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Sox18P43680 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Sox18P43680 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sox18P43680 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox18P43680 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox18P43680 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox18P43680 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.46■□□□□ 0.87
Sox18P43680 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sox18P43680 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox18P43680 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox18P43680 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.45■□□□□ 0.86
Sox18P43680 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox18P43680 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.45■□□□□ 0.86
Sox18P43680 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox18P43680 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.44■□□□□ 0.86
Sox18P43680 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.44■□□□□ 0.86
Sox18P43680 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.44■□□□□ 0.86
Sox18P43680 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox18P43680 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox18P43680 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox18P43680 Gm6139-201ENSMUST00000079261 882 ntBASIC20.44■□□□□ 0.86
Sox18P43680 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox18P43680 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sox18P43680 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox18P43680 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Sox18P43680 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Sox18P43680 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sox18P43680 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox18P43680 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox18P43680 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Sox18P43680 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox18P43680 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox18P43680 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Sox18P43680 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox18P43680 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.42■□□□□ 0.86
Sox18P43680 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.42■□□□□ 0.86
Sox18P43680 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox18P43680 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox18P43680 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sox18P43680 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox18P43680 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sox18P43680 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sox18P43680 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sox18P43680 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sox18P43680 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.41■□□□□ 0.86
Sox18P43680 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Sox18P43680 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.41■□□□□ 0.86
Sox18P43680 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sox18P43680 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sox18P43680 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox18P43680 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox18P43680 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Sox18P43680 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox18P43680 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Sox18P43680 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Sox18P43680 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Sox18P43680 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox18P43680 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox18P43680 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox18P43680 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sox18P43680 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.39■□□□□ 0.85
Sox18P43680 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Sox18P43680 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox18P43680 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox18P43680 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.39■□□□□ 0.85
Sox18P43680 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox18P43680 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox18P43680 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.38■□□□□ 0.85
Sox18P43680 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox18P43680 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Sox18P43680 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.37■□□□□ 0.85
Sox18P43680 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.37■□□□□ 0.85
Sox18P43680 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.37■□□□□ 0.85
Sox18P43680 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox18P43680 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox18P43680 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox18P43680 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sox18P43680 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms