Protein–RNA interactions for Protein: P41155

Ltb, Lymphotoxin-beta, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbP41155 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LtbP41155 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LtbP41155 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LtbP41155 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.36■□□□□ 0.53
LtbP41155 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.36■□□□□ 0.53
LtbP41155 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.36■□□□□ 0.53
LtbP41155 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LtbP41155 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LtbP41155 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LtbP41155 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LtbP41155 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
LtbP41155 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LtbP41155 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LtbP41155 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LtbP41155 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LtbP41155 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LtbP41155 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LtbP41155 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LtbP41155 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.35■□□□□ 0.53
LtbP41155 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LtbP41155 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LtbP41155 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LtbP41155 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LtbP41155 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LtbP41155 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LtbP41155 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LtbP41155 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LtbP41155 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.33■□□□□ 0.53
LtbP41155 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.33■□□□□ 0.52
LtbP41155 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.33■□□□□ 0.52
LtbP41155 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LtbP41155 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LtbP41155 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LtbP41155 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.32■□□□□ 0.52
LtbP41155 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbP41155 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbP41155 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
LtbP41155 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbP41155 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbP41155 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.32■□□□□ 0.52
LtbP41155 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LtbP41155 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LtbP41155 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbP41155 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LtbP41155 Gm14117-201ENSMUST00000122417 843 ntBASIC18.31■□□□□ 0.52
LtbP41155 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbP41155 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LtbP41155 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.3■□□□□ 0.52
LtbP41155 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LtbP41155 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LtbP41155 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LtbP41155 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LtbP41155 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LtbP41155 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LtbP41155 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.3■□□□□ 0.52
LtbP41155 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LtbP41155 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbP41155 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LtbP41155 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbP41155 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LtbP41155 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LtbP41155 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbP41155 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.29■□□□□ 0.52
LtbP41155 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LtbP41155 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.28■□□□□ 0.52
LtbP41155 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LtbP41155 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LtbP41155 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LtbP41155 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.28■□□□□ 0.52
LtbP41155 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.28■□□□□ 0.52
LtbP41155 Gm9959-201ENSMUST00000068277 390 ntBASIC18.28■□□□□ 0.52
LtbP41155 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LtbP41155 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LtbP41155 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbP41155 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbP41155 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.27■□□□□ 0.52
LtbP41155 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbP41155 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbP41155 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbP41155 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbP41155 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LtbP41155 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LtbP41155 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LtbP41155 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LtbP41155 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LtbP41155 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LtbP41155 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LtbP41155 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
LtbP41155 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LtbP41155 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LtbP41155 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LtbP41155 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LtbP41155 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LtbP41155 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LtbP41155 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LtbP41155 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LtbP41155 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.24■□□□□ 0.51
LtbP41155 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LtbP41155 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LtbP41155 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms