Protein–RNA interactions for Protein: P34960

Mmp12, Macrophage metalloelastase, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp12P34960 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp12P34960 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Mmp12P34960 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.25■□□□□ 0.83
Mmp12P34960 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp12P34960 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp12P34960 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp12P34960 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.25■□□□□ 0.83
Mmp12P34960 Gm7417-201ENSMUST00000192950 473 ntBASIC20.25■□□□□ 0.83
Mmp12P34960 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Mmp12P34960 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp12P34960 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp12P34960 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp12P34960 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp12P34960 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp12P34960 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.24■□□□□ 0.83
Mmp12P34960 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp12P34960 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.24■□□□□ 0.83
Mmp12P34960 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.24■□□□□ 0.83
Mmp12P34960 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Mmp12P34960 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp12P34960 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp12P34960 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Mmp12P34960 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp12P34960 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp12P34960 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp12P34960 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp12P34960 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp12P34960 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.23■□□□□ 0.83
Mmp12P34960 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.23■□□□□ 0.83
Mmp12P34960 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp12P34960 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp12P34960 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp12P34960 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp12P34960 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp12P34960 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Mmp12P34960 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.22■□□□□ 0.83
Mmp12P34960 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.22■□□□□ 0.83
Mmp12P34960 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp12P34960 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp12P34960 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp12P34960 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp12P34960 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp12P34960 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp12P34960 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp12P34960 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.21■□□□□ 0.83
Mmp12P34960 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp12P34960 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Mmp12P34960 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Mmp12P34960 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp12P34960 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Mmp12P34960 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.21■□□□□ 0.83
Mmp12P34960 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.2■□□□□ 0.82
Mmp12P34960 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.2■□□□□ 0.82
Mmp12P34960 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.2■□□□□ 0.82
Mmp12P34960 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Mmp12P34960 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp12P34960 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp12P34960 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.19■□□□□ 0.82
Mmp12P34960 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp12P34960 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Mmp12P34960 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp12P34960 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp12P34960 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Mmp12P34960 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Mmp12P34960 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp12P34960 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp12P34960 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp12P34960 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp12P34960 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.17■□□□□ 0.82
Mmp12P34960 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.17■□□□□ 0.82
Mmp12P34960 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp12P34960 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp12P34960 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp12P34960 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.17■□□□□ 0.82
Mmp12P34960 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.17■□□□□ 0.82
Mmp12P34960 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp12P34960 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Mmp12P34960 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Mmp12P34960 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp12P34960 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Mmp12P34960 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp12P34960 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Mmp12P34960 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp12P34960 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.16■□□□□ 0.82
Mmp12P34960 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Mmp12P34960 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp12P34960 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp12P34960 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp12P34960 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.15■□□□□ 0.82
Mmp12P34960 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.15■□□□□ 0.82
Mmp12P34960 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp12P34960 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp12P34960 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp12P34960 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.14■□□□□ 0.81
Mmp12P34960 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Mmp12P34960 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp12P34960 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp12P34960 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp12P34960 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp12P34960 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms