Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Nfkb1P25799 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nfkb1P25799 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Nfkb1P25799 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nfkb1P25799 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.93■■□□□ 1.1
Nfkb1P25799 Gm40881-201ENSMUST00000223397 166 ntBASIC21.93■■□□□ 1.1
Nfkb1P25799 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nfkb1P25799 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nfkb1P25799 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nfkb1P25799 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.92■■□□□ 1.1
Nfkb1P25799 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.92■■□□□ 1.1
Nfkb1P25799 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Nfkb1P25799 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Nfkb1P25799 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.92■■□□□ 1.1
Nfkb1P25799 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nfkb1P25799 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nfkb1P25799 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nfkb1P25799 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Nfkb1P25799 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nfkb1P25799 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nfkb1P25799 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nfkb1P25799 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nfkb1P25799 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nfkb1P25799 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nfkb1P25799 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.9■■□□□ 1.1
Nfkb1P25799 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
Nfkb1P25799 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nfkb1P25799 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nfkb1P25799 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nfkb1P25799 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nfkb1P25799 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nfkb1P25799 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nfkb1P25799 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nfkb1P25799 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Nfkb1P25799 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Nfkb1P25799 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nfkb1P25799 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nfkb1P25799 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.88■■□□□ 1.09
Nfkb1P25799 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.88■■□□□ 1.09
Nfkb1P25799 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nfkb1P25799 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nfkb1P25799 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nfkb1P25799 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.88■■□□□ 1.09
Nfkb1P25799 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nfkb1P25799 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Nfkb1P25799 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nfkb1P25799 Gm10399-202ENSMUST00000202768 748 ntBASIC21.87■■□□□ 1.09
Nfkb1P25799 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nfkb1P25799 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nfkb1P25799 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Nfkb1P25799 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nfkb1P25799 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nfkb1P25799 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nfkb1P25799 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nfkb1P25799 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nfkb1P25799 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.85■■□□□ 1.09
Nfkb1P25799 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nfkb1P25799 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nfkb1P25799 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nfkb1P25799 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.85■■□□□ 1.09
Nfkb1P25799 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nfkb1P25799 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.84■■□□□ 1.09
Nfkb1P25799 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nfkb1P25799 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Nfkb1P25799 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nfkb1P25799 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nfkb1P25799 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.83■■□□□ 1.09
Nfkb1P25799 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nfkb1P25799 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nfkb1P25799 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nfkb1P25799 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nfkb1P25799 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nfkb1P25799 Gm22238-201ENSMUST00000175222 88 ntBASIC21.82■■□□□ 1.08
Nfkb1P25799 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Nfkb1P25799 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nfkb1P25799 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nfkb1P25799 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nfkb1P25799 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nfkb1P25799 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nfkb1P25799 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Nfkb1P25799 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nfkb1P25799 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nfkb1P25799 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nfkb1P25799 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nfkb1P25799 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Nfkb1P25799 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Nfkb1P25799 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nfkb1P25799 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nfkb1P25799 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nfkb1P25799 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.8■■□□□ 1.08
Nfkb1P25799 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nfkb1P25799 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nfkb1P25799 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nfkb1P25799 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nfkb1P25799 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nfkb1P25799 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nfkb1P25799 Gm15039-201ENSMUST00000118914 875 ntBASIC21.79■■□□□ 1.08
Nfkb1P25799 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nfkb1P25799 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.79■■□□□ 1.08
Nfkb1P25799 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms