Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col8a2P25318 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col8a2P25318 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.9■□□□□ 0.46
Col8a2P25318 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col8a2P25318 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Col8a2P25318 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col8a2P25318 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col8a2P25318 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col8a2P25318 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col8a2P25318 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col8a2P25318 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col8a2P25318 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Col8a2P25318 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col8a2P25318 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col8a2P25318 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.88■□□□□ 0.45
Col8a2P25318 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col8a2P25318 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col8a2P25318 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Col8a2P25318 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col8a2P25318 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.88■□□□□ 0.45
Col8a2P25318 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Col8a2P25318 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col8a2P25318 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col8a2P25318 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col8a2P25318 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col8a2P25318 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col8a2P25318 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col8a2P25318 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.87■□□□□ 0.45
Col8a2P25318 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col8a2P25318 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col8a2P25318 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.87■□□□□ 0.45
Col8a2P25318 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.86■□□□□ 0.45
Col8a2P25318 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Col8a2P25318 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.86■□□□□ 0.45
Col8a2P25318 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col8a2P25318 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col8a2P25318 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.86■□□□□ 0.45
Col8a2P25318 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col8a2P25318 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col8a2P25318 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col8a2P25318 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col8a2P25318 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col8a2P25318 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col8a2P25318 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Col8a2P25318 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Col8a2P25318 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col8a2P25318 Gm45102-201ENSMUST00000207427 857 ntBASIC17.84■□□□□ 0.45
Col8a2P25318 Rps24-207ENSMUST00000224568 714 ntBASIC17.84■□□□□ 0.45
Col8a2P25318 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Col8a2P25318 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col8a2P25318 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Col8a2P25318 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col8a2P25318 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col8a2P25318 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col8a2P25318 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col8a2P25318 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.83■□□□□ 0.44
Col8a2P25318 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col8a2P25318 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col8a2P25318 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col8a2P25318 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col8a2P25318 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col8a2P25318 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col8a2P25318 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.82■□□□□ 0.44
Col8a2P25318 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.82■□□□□ 0.44
Col8a2P25318 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Col8a2P25318 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.82■□□□□ 0.44
Col8a2P25318 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col8a2P25318 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Col8a2P25318 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Col8a2P25318 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.82■□□□□ 0.44
Col8a2P25318 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col8a2P25318 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col8a2P25318 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col8a2P25318 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col8a2P25318 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col8a2P25318 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col8a2P25318 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col8a2P25318 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.81■□□□□ 0.44
Col8a2P25318 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.81■□□□□ 0.44
Col8a2P25318 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.81■□□□□ 0.44
Col8a2P25318 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Col8a2P25318 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col8a2P25318 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col8a2P25318 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Col8a2P25318 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col8a2P25318 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col8a2P25318 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Col8a2P25318 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.8■□□□□ 0.44
Col8a2P25318 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col8a2P25318 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col8a2P25318 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col8a2P25318 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col8a2P25318 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col8a2P25318 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Col8a2P25318 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col8a2P25318 Etf1-202ENSMUST00000180351 108 ntBASIC17.79■□□□□ 0.44
Col8a2P25318 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.79■□□□□ 0.44
Col8a2P25318 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col8a2P25318 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.79■□□□□ 0.44
Col8a2P25318 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms