Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.76■□□□□ 0.75
Tnfrsf1bP25119 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf1bP25119 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Tnfrsf1bP25119 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.76■□□□□ 0.75
Tnfrsf1bP25119 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf1bP25119 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.76■□□□□ 0.75
Tnfrsf1bP25119 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.75■□□□□ 0.75
Tnfrsf1bP25119 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.75■□□□□ 0.75
Tnfrsf1bP25119 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf1bP25119 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf1bP25119 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf1bP25119 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf1bP25119 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf1bP25119 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Tnfrsf1bP25119 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Tnfrsf1bP25119 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf1bP25119 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf1bP25119 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Tnfrsf1bP25119 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf1bP25119 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf1bP25119 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf1bP25119 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf1bP25119 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf1bP25119 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf1bP25119 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf1bP25119 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Tnfrsf1bP25119 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf1bP25119 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf1bP25119 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf1bP25119 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf1bP25119 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf1bP25119 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf1bP25119 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tnfrsf1bP25119 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.72■□□□□ 0.75
Tnfrsf1bP25119 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.71■□□□□ 0.75
Tnfrsf1bP25119 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Tnfrsf1bP25119 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Tnfrsf1bP25119 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.71■□□□□ 0.75
Tnfrsf1bP25119 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Tnfrsf1bP25119 Gm5812-201ENSMUST00000061073 957 ntBASIC19.71■□□□□ 0.75
Tnfrsf1bP25119 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.71■□□□□ 0.75
Tnfrsf1bP25119 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf1bP25119 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf1bP25119 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Tnfrsf1bP25119 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf1bP25119 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf1bP25119 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf1bP25119 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tnfrsf1bP25119 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf1bP25119 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tnfrsf1bP25119 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf1bP25119 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.69■□□□□ 0.74
Tnfrsf1bP25119 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.69■□□□□ 0.74
Tnfrsf1bP25119 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfrsf1bP25119 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Tnfrsf1bP25119 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf1bP25119 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf1bP25119 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
Tnfrsf1bP25119 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf1bP25119 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.68■□□□□ 0.74
Tnfrsf1bP25119 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf1bP25119 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Tnfrsf1bP25119 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf1bP25119 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf1bP25119 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf1bP25119 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf1bP25119 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf1bP25119 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf1bP25119 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tnfrsf1bP25119 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf1bP25119 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf1bP25119 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf1bP25119 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf1bP25119 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf1bP25119 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf1bP25119 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf1bP25119 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.66■□□□□ 0.74
Tnfrsf1bP25119 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf1bP25119 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf1bP25119 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tnfrsf1bP25119 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf1bP25119 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.65■□□□□ 0.74
Tnfrsf1bP25119 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Tnfrsf1bP25119 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.65■□□□□ 0.74
Tnfrsf1bP25119 Gm15820-201ENSMUST00000201566 728 ntBASIC19.65■□□□□ 0.74
Tnfrsf1bP25119 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tnfrsf1bP25119 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tnfrsf1bP25119 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf1bP25119 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.65■□□□□ 0.74
Tnfrsf1bP25119 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Tnfrsf1bP25119 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf1bP25119 Gm15546-201ENSMUST00000122095 826 ntBASIC19.64■□□□□ 0.73
Tnfrsf1bP25119 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Tnfrsf1bP25119 Gm10232-201ENSMUST00000089221 720 ntBASIC19.64■□□□□ 0.73
Tnfrsf1bP25119 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf1bP25119 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf1bP25119 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf1bP25119 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf1bP25119 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf1bP25119 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms