Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd48P18181 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd48P18181 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd48P18181 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd48P18181 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Cd48P18181 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd48P18181 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd48P18181 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd48P18181 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd48P18181 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cd48P18181 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cd48P18181 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cd48P18181 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd48P18181 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cd48P18181 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd48P18181 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cd48P18181 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd48P18181 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cd48P18181 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd48P18181 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cd48P18181 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cd48P18181 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cd48P18181 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cd48P18181 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd48P18181 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd48P18181 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd48P18181 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd48P18181 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cd48P18181 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd48P18181 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cd48P18181 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cd48P18181 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd48P18181 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cd48P18181 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd48P18181 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.99■□□□□ 0.63
Cd48P18181 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd48P18181 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd48P18181 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd48P18181 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd48P18181 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Cd48P18181 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cd48P18181 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cd48P18181 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd48P18181 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd48P18181 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd48P18181 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cd48P18181 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.98■□□□□ 0.63
Cd48P18181 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd48P18181 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.98■□□□□ 0.63
Cd48P18181 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.97■□□□□ 0.63
Cd48P18181 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cd48P18181 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd48P18181 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd48P18181 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd48P18181 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd48P18181 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd48P18181 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.96■□□□□ 0.63
Cd48P18181 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd48P18181 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd48P18181 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd48P18181 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd48P18181 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd48P18181 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd48P18181 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.95■□□□□ 0.62
Cd48P18181 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd48P18181 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd48P18181 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd48P18181 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd48P18181 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd48P18181 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cd48P18181 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd48P18181 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cd48P18181 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.93■□□□□ 0.62
Cd48P18181 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.93■□□□□ 0.62
Cd48P18181 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cd48P18181 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.93■□□□□ 0.62
Cd48P18181 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd48P18181 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd48P18181 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd48P18181 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cd48P18181 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd48P18181 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cd48P18181 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd48P18181 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.92■□□□□ 0.62
Cd48P18181 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cd48P18181 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.92■□□□□ 0.62
Cd48P18181 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Cd48P18181 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd48P18181 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cd48P18181 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd48P18181 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd48P18181 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cd48P18181 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.91■□□□□ 0.62
Cd48P18181 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cd48P18181 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.9■□□□□ 0.62
Cd48P18181 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cd48P18181 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Cd48P18181 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cd48P18181 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cd48P18181 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms