Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rb1P13405 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rb1P13405 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rb1P13405 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Rb1P13405 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rb1P13405 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.56■■□□□ 1.04
Rb1P13405 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.56■■□□□ 1.04
Rb1P13405 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rb1P13405 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rb1P13405 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rb1P13405 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rb1P13405 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rb1P13405 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rb1P13405 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rb1P13405 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rb1P13405 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.55■■□□□ 1.04
Rb1P13405 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rb1P13405 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rb1P13405 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rb1P13405 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.54■■□□□ 1.04
Rb1P13405 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rb1P13405 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rb1P13405 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rb1P13405 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rb1P13405 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rb1P13405 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rb1P13405 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.53■■□□□ 1.04
Rb1P13405 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Rb1P13405 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.53■■□□□ 1.04
Rb1P13405 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Rb1P13405 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rb1P13405 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rb1P13405 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rb1P13405 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.52■■□□□ 1.04
Rb1P13405 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rb1P13405 Gm7417-201ENSMUST00000192950 473 ntBASIC21.52■■□□□ 1.04
Rb1P13405 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rb1P13405 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rb1P13405 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rb1P13405 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rb1P13405 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rb1P13405 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rb1P13405 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rb1P13405 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Rb1P13405 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rb1P13405 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.51■■□□□ 1.03
Rb1P13405 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rb1P13405 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.51■■□□□ 1.03
Rb1P13405 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rb1P13405 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rb1P13405 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rb1P13405 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rb1P13405 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rb1P13405 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.49■■□□□ 1.03
Rb1P13405 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rb1P13405 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rb1P13405 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rb1P13405 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Rb1P13405 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rb1P13405 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rb1P13405 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rb1P13405 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.48■■□□□ 1.03
Rb1P13405 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rb1P13405 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rb1P13405 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
Rb1P13405 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.48■■□□□ 1.03
Rb1P13405 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.48■■□□□ 1.03
Rb1P13405 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rb1P13405 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rb1P13405 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rb1P13405 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.47■■□□□ 1.03
Rb1P13405 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rb1P13405 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Rb1P13405 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rb1P13405 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Rb1P13405 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rb1P13405 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Rb1P13405 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rb1P13405 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rb1P13405 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rb1P13405 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rb1P13405 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rb1P13405 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.45■■□□□ 1.02
Rb1P13405 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rb1P13405 Gm13241-201ENSMUST00000094493 780 ntBASIC21.45■■□□□ 1.02
Rb1P13405 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rb1P13405 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rb1P13405 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rb1P13405 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rb1P13405 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rb1P13405 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.43■■□□□ 1.02
Rb1P13405 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.43■■□□□ 1.02
Rb1P13405 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rb1P13405 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rb1P13405 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rb1P13405 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rb1P13405 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rb1P13405 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rb1P13405 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rb1P13405 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms