Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
NefmP08553 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC31.53■■■□□ 2.64
NefmP08553 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC31.52■■■□□ 2.64
NefmP08553 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.52■■■□□ 2.64
NefmP08553 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC31.52■■■□□ 2.64
NefmP08553 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
NefmP08553 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NefmP08553 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
NefmP08553 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
NefmP08553 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.64
NefmP08553 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
NefmP08553 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
NefmP08553 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC31.5■■■□□ 2.63
NefmP08553 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NefmP08553 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
NefmP08553 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
NefmP08553 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
NefmP08553 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NefmP08553 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NefmP08553 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NefmP08553 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NefmP08553 Gm43403-201ENSMUST00000198011 1786 ntBASIC31.48■■■□□ 2.63
NefmP08553 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
NefmP08553 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
NefmP08553 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
NefmP08553 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
NefmP08553 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
NefmP08553 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NefmP08553 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
NefmP08553 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NefmP08553 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
NefmP08553 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NefmP08553 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NefmP08553 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC31.46■■■□□ 2.63
NefmP08553 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NefmP08553 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
NefmP08553 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
NefmP08553 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
NefmP08553 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC31.45■■■□□ 2.63
NefmP08553 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC31.45■■■□□ 2.63
NefmP08553 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
NefmP08553 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
NefmP08553 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
NefmP08553 Hsf1-207ENSMUST00000228371 2102 ntBASIC31.44■■■□□ 2.62
NefmP08553 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NefmP08553 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
NefmP08553 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
NefmP08553 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
NefmP08553 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NefmP08553 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
NefmP08553 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NefmP08553 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
NefmP08553 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NefmP08553 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
NefmP08553 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
NefmP08553 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NefmP08553 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NefmP08553 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
NefmP08553 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
NefmP08553 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
NefmP08553 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NefmP08553 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NefmP08553 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NefmP08553 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NefmP08553 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
NefmP08553 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NefmP08553 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NefmP08553 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
NefmP08553 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
NefmP08553 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NefmP08553 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NefmP08553 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
NefmP08553 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC31.37■■■□□ 2.61
NefmP08553 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NefmP08553 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NefmP08553 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC31.37■■■□□ 2.61
NefmP08553 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
NefmP08553 Kdm3b-204ENSMUST00000224715 2032 ntBASIC31.36■■■□□ 2.61
NefmP08553 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
NefmP08553 Gm9806-201ENSMUST00000051080 552 ntBASIC31.36■■■□□ 2.61
NefmP08553 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC31.35■■■□□ 2.61
NefmP08553 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NefmP08553 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NefmP08553 Scarna2-201ENSMUST00000157560 414 ntBASIC31.35■■■□□ 2.61
NefmP08553 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
NefmP08553 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NefmP08553 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
NefmP08553 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC31.34■■■□□ 2.61
NefmP08553 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
NefmP08553 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC31.34■■■□□ 2.61
NefmP08553 AC151971.4-201ENSMUST00000214717 704 ntBASIC31.34■■■□□ 2.61
NefmP08553 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NefmP08553 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NefmP08553 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
NefmP08553 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
NefmP08553 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NefmP08553 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC31.33■■■□□ 2.61
NefmP08553 Gm16437-201ENSMUST00000025669 507 ntBASIC31.33■■■□□ 2.61
NefmP08553 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC31.33■■■□□ 2.61
NefmP08553 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC31.33■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms