Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a2P08122 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a2P08122 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.31■□□□□ 0.84
Col4a2P08122 Gm27454-201ENSMUST00000185090 204 ntBASIC20.31■□□□□ 0.84
Col4a2P08122 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.31■□□□□ 0.84
Col4a2P08122 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a2P08122 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Col4a2P08122 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a2P08122 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a2P08122 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.3■□□□□ 0.84
Col4a2P08122 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a2P08122 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a2P08122 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a2P08122 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Col4a2P08122 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.3■□□□□ 0.84
Col4a2P08122 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a2P08122 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.29■□□□□ 0.84
Col4a2P08122 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.29■□□□□ 0.84
Col4a2P08122 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.29■□□□□ 0.84
Col4a2P08122 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a2P08122 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.28■□□□□ 0.84
Col4a2P08122 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Col4a2P08122 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a2P08122 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a2P08122 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a2P08122 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a2P08122 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.27■□□□□ 0.84
Col4a2P08122 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a2P08122 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col4a2P08122 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Col4a2P08122 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.27■□□□□ 0.83
Col4a2P08122 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col4a2P08122 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col4a2P08122 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a2P08122 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a2P08122 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.26■□□□□ 0.83
Col4a2P08122 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.26■□□□□ 0.83
Col4a2P08122 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.26■□□□□ 0.83
Col4a2P08122 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.25■□□□□ 0.83
Col4a2P08122 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a2P08122 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a2P08122 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a2P08122 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a2P08122 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a2P08122 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a2P08122 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a2P08122 Gm12821-201ENSMUST00000120022 600 ntBASIC20.24■□□□□ 0.83
Col4a2P08122 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a2P08122 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a2P08122 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a2P08122 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Col4a2P08122 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Col4a2P08122 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Col4a2P08122 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.23■□□□□ 0.83
Col4a2P08122 Gm45417-201ENSMUST00000209533 758 ntBASIC20.23■□□□□ 0.83
Col4a2P08122 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a2P08122 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.23■□□□□ 0.83
Col4a2P08122 Golgb1-201ENSMUST00000023534 498 ntBASIC20.22■□□□□ 0.83
Col4a2P08122 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a2P08122 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Col4a2P08122 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a2P08122 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a2P08122 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a2P08122 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
Col4a2P08122 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Col4a2P08122 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a2P08122 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a2P08122 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a2P08122 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Col4a2P08122 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a2P08122 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.19■□□□□ 0.82
Col4a2P08122 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Col4a2P08122 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.19■□□□□ 0.82
Col4a2P08122 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a2P08122 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a2P08122 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a2P08122 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a2P08122 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a2P08122 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a2P08122 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Col4a2P08122 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Col4a2P08122 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a2P08122 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a2P08122 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Col4a2P08122 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a2P08122 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Col4a2P08122 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a2P08122 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.16■□□□□ 0.82
Col4a2P08122 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.16■□□□□ 0.82
Col4a2P08122 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a2P08122 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a2P08122 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a2P08122 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a2P08122 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a2P08122 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Col4a2P08122 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a2P08122 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a2P08122 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.16■□□□□ 0.82
Col4a2P08122 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a2P08122 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms