Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxa4P06798 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.14■□□□□ 0.98
Hoxa4P06798 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.14■□□□□ 0.97
Hoxa4P06798 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Hoxa4P06798 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxa4P06798 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.13■□□□□ 0.97
Hoxa4P06798 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxa4P06798 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Hoxa4P06798 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxa4P06798 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.13■□□□□ 0.97
Hoxa4P06798 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxa4P06798 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.13■□□□□ 0.97
Hoxa4P06798 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Hoxa4P06798 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxa4P06798 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxa4P06798 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxa4P06798 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.12■□□□□ 0.97
Hoxa4P06798 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxa4P06798 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxa4P06798 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hoxa4P06798 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.12■□□□□ 0.97
Hoxa4P06798 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.12■□□□□ 0.97
Hoxa4P06798 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxa4P06798 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.12■□□□□ 0.97
Hoxa4P06798 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.12■□□□□ 0.97
Hoxa4P06798 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxa4P06798 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.11■□□□□ 0.97
Hoxa4P06798 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxa4P06798 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.11■□□□□ 0.97
Hoxa4P06798 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.11■□□□□ 0.97
Hoxa4P06798 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.11■□□□□ 0.97
Hoxa4P06798 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.11■□□□□ 0.97
Hoxa4P06798 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxa4P06798 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxa4P06798 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Hoxa4P06798 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxa4P06798 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Hoxa4P06798 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxa4P06798 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Hoxa4P06798 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Hoxa4P06798 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxa4P06798 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Hoxa4P06798 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxa4P06798 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxa4P06798 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxa4P06798 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.08■□□□□ 0.97
Hoxa4P06798 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hoxa4P06798 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.08■□□□□ 0.97
Hoxa4P06798 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hoxa4P06798 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.07■□□□□ 0.96
Hoxa4P06798 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Hoxa4P06798 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxa4P06798 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxa4P06798 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxa4P06798 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxa4P06798 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxa4P06798 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hoxa4P06798 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxa4P06798 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxa4P06798 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxa4P06798 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxa4P06798 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxa4P06798 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Hoxa4P06798 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxa4P06798 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.05■□□□□ 0.96
Hoxa4P06798 Gm15820-201ENSMUST00000201566 728 ntBASIC21.05■□□□□ 0.96
Hoxa4P06798 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.05■□□□□ 0.96
Hoxa4P06798 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxa4P06798 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hoxa4P06798 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.05■□□□□ 0.96
Hoxa4P06798 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.05■□□□□ 0.96
Hoxa4P06798 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxa4P06798 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxa4P06798 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxa4P06798 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxa4P06798 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxa4P06798 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxa4P06798 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Hoxa4P06798 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hoxa4P06798 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxa4P06798 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxa4P06798 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxa4P06798 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxa4P06798 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxa4P06798 Gm10399-202ENSMUST00000202768 748 ntBASIC21.03■□□□□ 0.96
Hoxa4P06798 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxa4P06798 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hoxa4P06798 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxa4P06798 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.02■□□□□ 0.96
Hoxa4P06798 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.02■□□□□ 0.96
Hoxa4P06798 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hoxa4P06798 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hoxa4P06798 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Hoxa4P06798 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxa4P06798 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.01■□□□□ 0.95
Hoxa4P06798 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxa4P06798 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxa4P06798 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.01■□□□□ 0.95
Hoxa4P06798 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.01■□□□□ 0.95
Hoxa4P06798 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms