Protein–RNA interactions for Protein: O70576

Stag3, Cohesin subunit SA-3, mousemouse

Predictions only

Length 1,240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag3O70576 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Stag3O70576 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Stag3O70576 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Stag3O70576 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Stag3O70576 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Stag3O70576 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC29.56■■■□□ 2.32
Stag3O70576 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC29.56■■■□□ 2.32
Stag3O70576 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
Stag3O70576 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Stag3O70576 Gm12922-201ENSMUST00000120626 809 ntBASIC29.55■■■□□ 2.32
Stag3O70576 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Stag3O70576 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC29.54■■■□□ 2.32
Stag3O70576 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Stag3O70576 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
Stag3O70576 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Stag3O70576 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Stag3O70576 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Stag3O70576 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC29.53■■■□□ 2.32
Stag3O70576 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC29.53■■■□□ 2.32
Stag3O70576 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC29.52■■■□□ 2.32
Stag3O70576 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
Stag3O70576 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC29.52■■■□□ 2.32
Stag3O70576 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Stag3O70576 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC29.52■■■□□ 2.32
Stag3O70576 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Stag3O70576 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
Stag3O70576 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
Stag3O70576 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
Stag3O70576 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Stag3O70576 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Stag3O70576 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Stag3O70576 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Stag3O70576 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Stag3O70576 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Stag3O70576 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC29.5■■■□□ 2.31
Stag3O70576 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Stag3O70576 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC29.5■■■□□ 2.31
Stag3O70576 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Stag3O70576 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Stag3O70576 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Stag3O70576 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC29.49■■■□□ 2.31
Stag3O70576 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC29.49■■■□□ 2.31
Stag3O70576 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC29.49■■■□□ 2.31
Stag3O70576 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC29.49■■■□□ 2.31
Stag3O70576 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC29.49■■■□□ 2.31
Stag3O70576 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Stag3O70576 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Stag3O70576 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
Stag3O70576 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Stag3O70576 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Stag3O70576 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Stag3O70576 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Stag3O70576 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Stag3O70576 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Stag3O70576 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC29.48■■■□□ 2.31
Stag3O70576 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Stag3O70576 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Stag3O70576 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Stag3O70576 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
Stag3O70576 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
Stag3O70576 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC29.46■■■□□ 2.31
Stag3O70576 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC29.46■■■□□ 2.31
Stag3O70576 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Stag3O70576 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC29.45■■■□□ 2.31
Stag3O70576 AC140930.3-201ENSMUST00000222935 274 ntBASIC29.45■■■□□ 2.31
Stag3O70576 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Stag3O70576 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Stag3O70576 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Stag3O70576 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Stag3O70576 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Stag3O70576 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Stag3O70576 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Stag3O70576 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Stag3O70576 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
Stag3O70576 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Stag3O70576 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC29.43■■■□□ 2.3
Stag3O70576 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC29.43■■■□□ 2.3
Stag3O70576 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Stag3O70576 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Stag3O70576 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Stag3O70576 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Stag3O70576 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC29.42■■■□□ 2.3
Stag3O70576 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC29.42■■■□□ 2.3
Stag3O70576 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
Stag3O70576 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC29.42■■■□□ 2.3
Stag3O70576 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
Stag3O70576 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC29.41■■■□□ 2.3
Stag3O70576 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Stag3O70576 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Stag3O70576 AC158990.1-201ENSMUST00000221450 2016 ntBASIC29.4■■■□□ 2.3
Stag3O70576 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Stag3O70576 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Stag3O70576 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC29.39■■■□□ 2.3
Stag3O70576 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Stag3O70576 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC29.39■■■□□ 2.3
Stag3O70576 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC29.39■■■□□ 2.3
Stag3O70576 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.29
Stag3O70576 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Stag3O70576 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Stag3O70576 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms