Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Alx3O70137 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Alx3O70137 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.26■□□□□ 0.67
Alx3O70137 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx3O70137 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.25■□□□□ 0.67
Alx3O70137 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx3O70137 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx3O70137 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Alx3O70137 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.25■□□□□ 0.67
Alx3O70137 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx3O70137 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx3O70137 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx3O70137 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Alx3O70137 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx3O70137 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Alx3O70137 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.24■□□□□ 0.67
Alx3O70137 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Alx3O70137 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx3O70137 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Alx3O70137 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx3O70137 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx3O70137 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx3O70137 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx3O70137 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Alx3O70137 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Alx3O70137 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Alx3O70137 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Alx3O70137 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx3O70137 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Alx3O70137 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alx3O70137 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alx3O70137 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.22■□□□□ 0.67
Alx3O70137 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.22■□□□□ 0.67
Alx3O70137 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Alx3O70137 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.22■□□□□ 0.67
Alx3O70137 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Alx3O70137 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Alx3O70137 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Alx3O70137 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Alx3O70137 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alx3O70137 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alx3O70137 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alx3O70137 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alx3O70137 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.21■□□□□ 0.67
Alx3O70137 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Alx3O70137 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alx3O70137 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Alx3O70137 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Alx3O70137 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.2■□□□□ 0.66
Alx3O70137 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.2■□□□□ 0.66
Alx3O70137 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.2■□□□□ 0.66
Alx3O70137 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx3O70137 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx3O70137 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Alx3O70137 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx3O70137 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Alx3O70137 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Alx3O70137 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alx3O70137 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Alx3O70137 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx3O70137 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx3O70137 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx3O70137 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx3O70137 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx3O70137 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx3O70137 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Alx3O70137 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Alx3O70137 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx3O70137 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Alx3O70137 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Alx3O70137 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alx3O70137 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Alx3O70137 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Alx3O70137 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Alx3O70137 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Alx3O70137 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Alx3O70137 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alx3O70137 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alx3O70137 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.16■□□□□ 0.66
Alx3O70137 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Alx3O70137 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Alx3O70137 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Alx3O70137 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.16■□□□□ 0.66
Alx3O70137 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx3O70137 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx3O70137 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx3O70137 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Alx3O70137 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx3O70137 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx3O70137 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alx3O70137 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Alx3O70137 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Alx3O70137 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.14■□□□□ 0.66
Alx3O70137 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alx3O70137 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alx3O70137 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Alx3O70137 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Alx3O70137 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Alx3O70137 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx3O70137 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms