Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh12O55134 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh12O55134 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.27■□□□□ 0.68
Pcdh12O55134 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.27■□□□□ 0.68
Pcdh12O55134 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdh12O55134 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdh12O55134 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdh12O55134 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh12O55134 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh12O55134 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh12O55134 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh12O55134 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdh12O55134 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.25■□□□□ 0.67
Pcdh12O55134 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh12O55134 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh12O55134 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh12O55134 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.24■□□□□ 0.67
Pcdh12O55134 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.24■□□□□ 0.67
Pcdh12O55134 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh12O55134 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh12O55134 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh12O55134 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdh12O55134 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh12O55134 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh12O55134 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh12O55134 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdh12O55134 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh12O55134 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh12O55134 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh12O55134 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh12O55134 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh12O55134 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcdh12O55134 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.22■□□□□ 0.67
Pcdh12O55134 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdh12O55134 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pcdh12O55134 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh12O55134 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh12O55134 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh12O55134 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdh12O55134 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh12O55134 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh12O55134 Gm45444-201ENSMUST00000211394 898 ntBASIC19.21■□□□□ 0.67
Pcdh12O55134 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdh12O55134 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdh12O55134 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh12O55134 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh12O55134 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh12O55134 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh12O55134 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh12O55134 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.2■□□□□ 0.66
Pcdh12O55134 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh12O55134 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Pcdh12O55134 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh12O55134 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.2■□□□□ 0.66
Pcdh12O55134 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh12O55134 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pcdh12O55134 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh12O55134 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh12O55134 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh12O55134 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh12O55134 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh12O55134 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh12O55134 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcdh12O55134 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh12O55134 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh12O55134 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh12O55134 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh12O55134 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh12O55134 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdh12O55134 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh12O55134 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdh12O55134 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh12O55134 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh12O55134 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh12O55134 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh12O55134 Gm43566-201ENSMUST00000196851 808 ntBASIC19.18■□□□□ 0.66
Pcdh12O55134 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdh12O55134 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh12O55134 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdh12O55134 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh12O55134 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh12O55134 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.17■□□□□ 0.66
Pcdh12O55134 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh12O55134 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh12O55134 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh12O55134 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh12O55134 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh12O55134 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdh12O55134 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdh12O55134 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pcdh12O55134 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh12O55134 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh12O55134 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdh12O55134 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh12O55134 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh12O55134 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh12O55134 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdh12O55134 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.14■□□□□ 0.66
Pcdh12O55134 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdh12O55134 Gm13238-201ENSMUST00000117655 780 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms