Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Prom1O54990 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Prom1O54990 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Prom1O54990 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prom1O54990 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.79■■□□□ 1.4
Prom1O54990 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Prom1O54990 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prom1O54990 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prom1O54990 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Prom1O54990 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.78■■□□□ 1.4
Prom1O54990 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Prom1O54990 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prom1O54990 Gm12922-201ENSMUST00000120626 809 ntBASIC23.77■■□□□ 1.4
Prom1O54990 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prom1O54990 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prom1O54990 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prom1O54990 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Prom1O54990 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Prom1O54990 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.76■■□□□ 1.39
Prom1O54990 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Prom1O54990 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.76■■□□□ 1.39
Prom1O54990 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prom1O54990 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Prom1O54990 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prom1O54990 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prom1O54990 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Prom1O54990 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Prom1O54990 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Prom1O54990 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Prom1O54990 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Prom1O54990 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Prom1O54990 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.74■■□□□ 1.39
Prom1O54990 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Prom1O54990 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Prom1O54990 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Prom1O54990 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prom1O54990 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Prom1O54990 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prom1O54990 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prom1O54990 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prom1O54990 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Prom1O54990 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Prom1O54990 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Prom1O54990 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.71■■□□□ 1.39
Prom1O54990 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Prom1O54990 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.71■■□□□ 1.39
Prom1O54990 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Prom1O54990 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Prom1O54990 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.39
Prom1O54990 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.7■■□□□ 1.38
Prom1O54990 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.7■■□□□ 1.38
Prom1O54990 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Prom1O54990 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prom1O54990 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Prom1O54990 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prom1O54990 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prom1O54990 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC23.69■■□□□ 1.38
Prom1O54990 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prom1O54990 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.69■■□□□ 1.38
Prom1O54990 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.69■■□□□ 1.38
Prom1O54990 Gm27454-201ENSMUST00000185090 204 ntBASIC23.69■■□□□ 1.38
Prom1O54990 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prom1O54990 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prom1O54990 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prom1O54990 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Prom1O54990 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Prom1O54990 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.68■■□□□ 1.38
Prom1O54990 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.68■■□□□ 1.38
Prom1O54990 Gm45417-201ENSMUST00000209533 758 ntBASIC23.68■■□□□ 1.38
Prom1O54990 Golgb1-201ENSMUST00000023534 498 ntBASIC23.68■■□□□ 1.38
Prom1O54990 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Prom1O54990 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
Prom1O54990 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.67■■□□□ 1.38
Prom1O54990 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.67■■□□□ 1.38
Prom1O54990 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
Prom1O54990 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Prom1O54990 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prom1O54990 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Prom1O54990 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Prom1O54990 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Prom1O54990 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Prom1O54990 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Prom1O54990 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.66■■□□□ 1.38
Prom1O54990 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Prom1O54990 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Prom1O54990 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Prom1O54990 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Prom1O54990 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Prom1O54990 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Prom1O54990 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.65■■□□□ 1.38
Prom1O54990 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Prom1O54990 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Prom1O54990 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Prom1O54990 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Prom1O54990 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Prom1O54990 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Prom1O54990 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Prom1O54990 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Prom1O54990 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
Prom1O54990 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms