Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc1a6O35544 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc1a6O35544 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Slc1a6O35544 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc1a6O35544 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.98■□□□□ 0.95
Slc1a6O35544 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc1a6O35544 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc1a6O35544 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Slc1a6O35544 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc1a6O35544 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc1a6O35544 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc1a6O35544 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc1a6O35544 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc1a6O35544 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc1a6O35544 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Slc1a6O35544 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc1a6O35544 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc1a6O35544 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc1a6O35544 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.96■□□□□ 0.95
Slc1a6O35544 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc1a6O35544 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.96■□□□□ 0.95
Slc1a6O35544 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.96■□□□□ 0.95
Slc1a6O35544 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc1a6O35544 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Slc1a6O35544 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Slc1a6O35544 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc1a6O35544 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc1a6O35544 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc1a6O35544 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc1a6O35544 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.95■□□□□ 0.94
Slc1a6O35544 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc1a6O35544 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Slc1a6O35544 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Slc1a6O35544 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc1a6O35544 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc1a6O35544 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Slc1a6O35544 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc1a6O35544 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc1a6O35544 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc1a6O35544 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc1a6O35544 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc1a6O35544 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc1a6O35544 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Slc1a6O35544 Notumos-201ENSMUST00000151998 2659 ntBASIC20.93■□□□□ 0.94
Slc1a6O35544 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Slc1a6O35544 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc1a6O35544 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc1a6O35544 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc1a6O35544 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc1a6O35544 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc1a6O35544 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Slc1a6O35544 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc1a6O35544 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a6O35544 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a6O35544 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a6O35544 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a6O35544 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a6O35544 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a6O35544 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a6O35544 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a6O35544 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc1a6O35544 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc1a6O35544 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.89■□□□□ 0.93
Slc1a6O35544 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a6O35544 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Slc1a6O35544 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a6O35544 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Slc1a6O35544 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc1a6O35544 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a6O35544 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a6O35544 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a6O35544 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.88■□□□□ 0.93
Slc1a6O35544 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.88■□□□□ 0.93
Slc1a6O35544 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a6O35544 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a6O35544 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc1a6O35544 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Slc1a6O35544 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc1a6O35544 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc1a6O35544 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc1a6O35544 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc1a6O35544 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a6O35544 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a6O35544 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a6O35544 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.86■□□□□ 0.93
Slc1a6O35544 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Slc1a6O35544 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc1a6O35544 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.85■□□□□ 0.93
Slc1a6O35544 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Slc1a6O35544 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.85■□□□□ 0.93
Slc1a6O35544 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a6O35544 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
Slc1a6O35544 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.85■□□□□ 0.93
Slc1a6O35544 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc1a6O35544 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Slc1a6O35544 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a6O35544 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc1a6O35544 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.84■□□□□ 0.93
Slc1a6O35544 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.84■□□□□ 0.93
Slc1a6O35544 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms