Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Capn1O35350 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Capn1O35350 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Capn1O35350 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Capn1O35350 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Capn1O35350 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Capn1O35350 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Capn1O35350 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Capn1O35350 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Capn1O35350 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Capn1O35350 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Capn1O35350 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Capn1O35350 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Capn1O35350 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Capn1O35350 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Capn1O35350 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Capn1O35350 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Capn1O35350 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.57■□□□□ 0.72
Capn1O35350 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Capn1O35350 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.57■□□□□ 0.72
Capn1O35350 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Capn1O35350 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Capn1O35350 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Capn1O35350 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Capn1O35350 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Capn1O35350 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.56■□□□□ 0.72
Capn1O35350 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Capn1O35350 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Capn1O35350 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Capn1O35350 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Capn1O35350 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Capn1O35350 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Capn1O35350 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Capn1O35350 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Capn1O35350 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Capn1O35350 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Capn1O35350 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Capn1O35350 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Capn1O35350 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Capn1O35350 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.55■□□□□ 0.72
Capn1O35350 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Capn1O35350 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Capn1O35350 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.55■□□□□ 0.72
Capn1O35350 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Capn1O35350 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Capn1O35350 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Capn1O35350 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Capn1O35350 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Capn1O35350 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Capn1O35350 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Capn1O35350 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Capn1O35350 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Capn1O35350 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Capn1O35350 Gm15039-201ENSMUST00000118914 875 ntBASIC19.54■□□□□ 0.72
Capn1O35350 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Capn1O35350 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.53■□□□□ 0.72
Capn1O35350 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Capn1O35350 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Capn1O35350 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Capn1O35350 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Capn1O35350 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.53■□□□□ 0.72
Capn1O35350 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Capn1O35350 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Capn1O35350 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Capn1O35350 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Capn1O35350 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Capn1O35350 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Capn1O35350 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.52■□□□□ 0.72
Capn1O35350 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Capn1O35350 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Capn1O35350 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Capn1O35350 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Capn1O35350 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Capn1O35350 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Capn1O35350 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Capn1O35350 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Capn1O35350 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Capn1O35350 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.51■□□□□ 0.71
Capn1O35350 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.51■□□□□ 0.71
Capn1O35350 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Capn1O35350 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Capn1O35350 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Capn1O35350 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Capn1O35350 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Capn1O35350 Etf1-202ENSMUST00000180351 108 ntBASIC19.5■□□□□ 0.71
Capn1O35350 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.5■□□□□ 0.71
Capn1O35350 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.5■□□□□ 0.71
Capn1O35350 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Capn1O35350 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Capn1O35350 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Capn1O35350 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Capn1O35350 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Capn1O35350 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.49■□□□□ 0.71
Capn1O35350 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Capn1O35350 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.49■□□□□ 0.71
Capn1O35350 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.49■□□□□ 0.71
Capn1O35350 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Capn1O35350 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Capn1O35350 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Capn1O35350 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms