Protein–RNA interactions for Protein: O35280

Chek1, Serine/threonine-protein kinase Chk1, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chek1O35280 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.34■□□□□ 0.37
Chek1O35280 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chek1O35280 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chek1O35280 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Chek1O35280 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chek1O35280 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chek1O35280 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chek1O35280 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chek1O35280 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chek1O35280 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chek1O35280 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chek1O35280 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chek1O35280 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chek1O35280 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chek1O35280 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.31■□□□□ 0.36
Chek1O35280 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chek1O35280 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chek1O35280 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Chek1O35280 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.31■□□□□ 0.36
Chek1O35280 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chek1O35280 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chek1O35280 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Chek1O35280 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chek1O35280 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chek1O35280 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chek1O35280 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chek1O35280 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chek1O35280 Nkain2-201ENSMUST00000092602 558 ntBASIC17.3■□□□□ 0.36
Chek1O35280 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chek1O35280 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chek1O35280 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Chek1O35280 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chek1O35280 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chek1O35280 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chek1O35280 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
Chek1O35280 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chek1O35280 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.29■□□□□ 0.36
Chek1O35280 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chek1O35280 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chek1O35280 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chek1O35280 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chek1O35280 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Chek1O35280 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chek1O35280 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chek1O35280 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Chek1O35280 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chek1O35280 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chek1O35280 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chek1O35280 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.28■□□□□ 0.36
Chek1O35280 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chek1O35280 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chek1O35280 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chek1O35280 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Chek1O35280 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.27■□□□□ 0.36
Chek1O35280 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chek1O35280 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chek1O35280 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chek1O35280 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.26■□□□□ 0.35
Chek1O35280 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chek1O35280 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chek1O35280 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chek1O35280 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chek1O35280 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chek1O35280 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.25■□□□□ 0.35
Chek1O35280 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chek1O35280 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chek1O35280 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chek1O35280 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Chek1O35280 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chek1O35280 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chek1O35280 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chek1O35280 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chek1O35280 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chek1O35280 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chek1O35280 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Chek1O35280 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.24■□□□□ 0.35
Chek1O35280 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chek1O35280 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chek1O35280 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Chek1O35280 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chek1O35280 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chek1O35280 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chek1O35280 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chek1O35280 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chek1O35280 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chek1O35280 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Chek1O35280 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chek1O35280 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chek1O35280 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chek1O35280 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chek1O35280 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chek1O35280 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Chek1O35280 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.22■□□□□ 0.35
Chek1O35280 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Chek1O35280 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chek1O35280 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chek1O35280 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Chek1O35280 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chek1O35280 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chek1O35280 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms