Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfsf11O35235 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfsf11O35235 Iqck-206ENSMUST00000208658 2891 ntBASIC16.56■□□□□ 0.24
Tnfsf11O35235 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfsf11O35235 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.56■□□□□ 0.24
Tnfsf11O35235 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfsf11O35235 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.56■□□□□ 0.24
Tnfsf11O35235 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfsf11O35235 Gm6821-201ENSMUST00000107540 542 ntBASIC16.56■□□□□ 0.24
Tnfsf11O35235 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfsf11O35235 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Tnfsf11O35235 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfsf11O35235 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfsf11O35235 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.56■□□□□ 0.24
Tnfsf11O35235 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Tnfsf11O35235 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfsf11O35235 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfsf11O35235 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfsf11O35235 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfsf11O35235 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfsf11O35235 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnfsf11O35235 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnfsf11O35235 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnfsf11O35235 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.54■□□□□ 0.24
Tnfsf11O35235 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tnfsf11O35235 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnfsf11O35235 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnfsf11O35235 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tnfsf11O35235 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfsf11O35235 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.53■□□□□ 0.24
Tnfsf11O35235 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfsf11O35235 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfsf11O35235 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfsf11O35235 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfsf11O35235 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfsf11O35235 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfsf11O35235 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfsf11O35235 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.53■□□□□ 0.24
Tnfsf11O35235 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tnfsf11O35235 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tnfsf11O35235 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tnfsf11O35235 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tnfsf11O35235 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tnfsf11O35235 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tnfsf11O35235 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tnfsf11O35235 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tnfsf11O35235 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.52■□□□□ 0.24
Tnfsf11O35235 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.52■□□□□ 0.24
Tnfsf11O35235 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tnfsf11O35235 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tnfsf11O35235 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tnfsf11O35235 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tnfsf11O35235 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.52■□□□□ 0.23
Tnfsf11O35235 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Tnfsf11O35235 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Tnfsf11O35235 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.51■□□□□ 0.23
Tnfsf11O35235 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfsf11O35235 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfsf11O35235 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfsf11O35235 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Tnfsf11O35235 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tnfsf11O35235 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.5■□□□□ 0.23
Tnfsf11O35235 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfsf11O35235 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.5■□□□□ 0.23
Tnfsf11O35235 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.5■□□□□ 0.23
Tnfsf11O35235 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfsf11O35235 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfsf11O35235 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfsf11O35235 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfsf11O35235 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfsf11O35235 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfsf11O35235 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.49■□□□□ 0.23
Tnfsf11O35235 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Tnfsf11O35235 Gm4799-201ENSMUST00000095396 657 ntBASIC16.49■□□□□ 0.23
Tnfsf11O35235 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfsf11O35235 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Tnfsf11O35235 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfsf11O35235 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Tnfsf11O35235 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfsf11O35235 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfsf11O35235 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfsf11O35235 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.48■□□□□ 0.23
Tnfsf11O35235 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.48■□□□□ 0.23
Tnfsf11O35235 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfsf11O35235 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Tnfsf11O35235 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfsf11O35235 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.48■□□□□ 0.23
Tnfsf11O35235 Gm9812-201ENSMUST00000061934 968 ntBASIC16.48■□□□□ 0.23
Tnfsf11O35235 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfsf11O35235 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfsf11O35235 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfsf11O35235 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfsf11O35235 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfsf11O35235 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.47■□□□□ 0.23
Tnfsf11O35235 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfsf11O35235 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfsf11O35235 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfsf11O35235 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Tnfsf11O35235 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfsf11O35235 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms