Protein–RNA interactions for Protein: O35228

Ebi3, Interleukin-27 subunit beta, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebi3O35228 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebi3O35228 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ebi3O35228 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebi3O35228 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ebi3O35228 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Ebi3O35228 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.36■□□□□ 0.21
Ebi3O35228 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ebi3O35228 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ebi3O35228 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ebi3O35228 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebi3O35228 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ebi3O35228 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.36■□□□□ 0.21
Ebi3O35228 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ebi3O35228 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebi3O35228 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ebi3O35228 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebi3O35228 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ebi3O35228 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ebi3O35228 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebi3O35228 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ebi3O35228 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ebi3O35228 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebi3O35228 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebi3O35228 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebi3O35228 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebi3O35228 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.34■□□□□ 0.21
Ebi3O35228 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
Ebi3O35228 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebi3O35228 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ebi3O35228 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ebi3O35228 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ebi3O35228 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.33■□□□□ 0.2
Ebi3O35228 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ebi3O35228 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ebi3O35228 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ebi3O35228 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ebi3O35228 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.32■□□□□ 0.2
Ebi3O35228 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebi3O35228 Gm12366-201ENSMUST00000121722 873 ntBASIC16.32■□□□□ 0.2
Ebi3O35228 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.32■□□□□ 0.2
Ebi3O35228 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.32■□□□□ 0.2
Ebi3O35228 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ebi3O35228 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebi3O35228 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebi3O35228 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebi3O35228 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebi3O35228 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.32■□□□□ 0.2
Ebi3O35228 Gm5786-201ENSMUST00000085368 882 ntBASIC16.32■□□□□ 0.2
Ebi3O35228 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebi3O35228 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ebi3O35228 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ebi3O35228 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ebi3O35228 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ebi3O35228 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ebi3O35228 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebi3O35228 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebi3O35228 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebi3O35228 Mir6538-201ENSMUST00000183713 110 ntBASIC16.31■□□□□ 0.2
Ebi3O35228 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ebi3O35228 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Ebi3O35228 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebi3O35228 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebi3O35228 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebi3O35228 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.3■□□□□ 0.2
Ebi3O35228 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebi3O35228 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebi3O35228 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebi3O35228 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebi3O35228 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebi3O35228 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebi3O35228 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ebi3O35228 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.29■□□□□ 0.2
Ebi3O35228 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebi3O35228 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebi3O35228 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.29■□□□□ 0.2
Ebi3O35228 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ebi3O35228 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ebi3O35228 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.28■□□□□ 0.2
Ebi3O35228 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.28■□□□□ 0.2
Ebi3O35228 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ebi3O35228 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebi3O35228 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ebi3O35228 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.28■□□□□ 0.2
Ebi3O35228 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ebi3O35228 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.28■□□□□ 0.2
Ebi3O35228 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebi3O35228 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebi3O35228 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebi3O35228 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.28■□□□□ 0.2
Ebi3O35228 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ebi3O35228 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Ebi3O35228 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebi3O35228 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.28■□□□□ 0.2
Ebi3O35228 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebi3O35228 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebi3O35228 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ebi3O35228 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.27■□□□□ 0.2
Ebi3O35228 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ebi3O35228 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebi3O35228 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms