Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3yl1O08641 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.21■□□□□ 0.83
Sh3yl1O08641 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sh3yl1O08641 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sh3yl1O08641 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3yl1O08641 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Sh3yl1O08641 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sh3yl1O08641 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3yl1O08641 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.2■□□□□ 0.82
Sh3yl1O08641 Gm13238-201ENSMUST00000117655 780 ntBASIC20.2■□□□□ 0.82
Sh3yl1O08641 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.2■□□□□ 0.82
Sh3yl1O08641 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.19■□□□□ 0.82
Sh3yl1O08641 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3yl1O08641 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3yl1O08641 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3yl1O08641 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3yl1O08641 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.18■□□□□ 0.82
Sh3yl1O08641 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3yl1O08641 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3yl1O08641 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3yl1O08641 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.18■□□□□ 0.82
Sh3yl1O08641 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3yl1O08641 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sh3yl1O08641 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3yl1O08641 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Sh3yl1O08641 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Sh3yl1O08641 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Sh3yl1O08641 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3yl1O08641 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3yl1O08641 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3yl1O08641 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3yl1O08641 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3yl1O08641 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3yl1O08641 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Sh3yl1O08641 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3yl1O08641 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3yl1O08641 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Sh3yl1O08641 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Sh3yl1O08641 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3yl1O08641 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3yl1O08641 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3yl1O08641 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3yl1O08641 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Sh3yl1O08641 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3yl1O08641 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3yl1O08641 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Sh3yl1O08641 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3yl1O08641 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Sh3yl1O08641 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sh3yl1O08641 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sh3yl1O08641 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3yl1O08641 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3yl1O08641 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.14■□□□□ 0.81
Sh3yl1O08641 Gm45444-201ENSMUST00000211394 898 ntBASIC20.14■□□□□ 0.81
Sh3yl1O08641 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3yl1O08641 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3yl1O08641 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Sh3yl1O08641 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3yl1O08641 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3yl1O08641 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.13■□□□□ 0.81
Sh3yl1O08641 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3yl1O08641 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3yl1O08641 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3yl1O08641 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.13■□□□□ 0.81
Sh3yl1O08641 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.13■□□□□ 0.81
Sh3yl1O08641 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3yl1O08641 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.12■□□□□ 0.81
Sh3yl1O08641 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3yl1O08641 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3yl1O08641 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3yl1O08641 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3yl1O08641 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Sh3yl1O08641 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3yl1O08641 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3yl1O08641 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3yl1O08641 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3yl1O08641 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3yl1O08641 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3yl1O08641 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3yl1O08641 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3yl1O08641 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Sh3yl1O08641 Gm43566-201ENSMUST00000196851 808 ntBASIC20.1■□□□□ 0.81
Sh3yl1O08641 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3yl1O08641 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3yl1O08641 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Sh3yl1O08641 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3yl1O08641 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3yl1O08641 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.09■□□□□ 0.81
Sh3yl1O08641 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3yl1O08641 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3yl1O08641 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3yl1O08641 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.09■□□□□ 0.81
Sh3yl1O08641 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3yl1O08641 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3yl1O08641 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3yl1O08641 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3yl1O08641 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3yl1O08641 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Sh3yl1O08641 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3yl1O08641 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms