Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Raet1cO08604 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Raet1cO08604 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Raet1cO08604 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.02■□□□□ 0.64
Raet1cO08604 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Raet1cO08604 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Raet1cO08604 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Raet1cO08604 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Raet1cO08604 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Raet1cO08604 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Raet1cO08604 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.01■□□□□ 0.63
Raet1cO08604 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Raet1cO08604 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.01■□□□□ 0.63
Raet1cO08604 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Raet1cO08604 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Raet1cO08604 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Raet1cO08604 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.01■□□□□ 0.63
Raet1cO08604 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Raet1cO08604 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.01■□□□□ 0.63
Raet1cO08604 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Raet1cO08604 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19■□□□□ 0.63
Raet1cO08604 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Raet1cO08604 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19■□□□□ 0.63
Raet1cO08604 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19■□□□□ 0.63
Raet1cO08604 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Raet1cO08604 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Raet1cO08604 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Raet1cO08604 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.99■□□□□ 0.63
Raet1cO08604 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Raet1cO08604 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Raet1cO08604 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Raet1cO08604 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.99■□□□□ 0.63
Raet1cO08604 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.99■□□□□ 0.63
Raet1cO08604 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Raet1cO08604 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Raet1cO08604 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Raet1cO08604 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Raet1cO08604 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Raet1cO08604 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Raet1cO08604 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.98■□□□□ 0.63
Raet1cO08604 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.98■□□□□ 0.63
Raet1cO08604 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raet1cO08604 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raet1cO08604 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Raet1cO08604 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raet1cO08604 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.97■□□□□ 0.63
Raet1cO08604 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Raet1cO08604 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Raet1cO08604 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Raet1cO08604 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.97■□□□□ 0.63
Raet1cO08604 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Raet1cO08604 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Raet1cO08604 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Raet1cO08604 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Raet1cO08604 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Raet1cO08604 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Raet1cO08604 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Raet1cO08604 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Raet1cO08604 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Raet1cO08604 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Raet1cO08604 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Raet1cO08604 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.95■□□□□ 0.62
Raet1cO08604 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Raet1cO08604 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Raet1cO08604 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Raet1cO08604 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Raet1cO08604 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
Raet1cO08604 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Raet1cO08604 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1cO08604 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1cO08604 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.94■□□□□ 0.62
Raet1cO08604 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1cO08604 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1cO08604 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1cO08604 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1cO08604 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1cO08604 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1cO08604 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Raet1cO08604 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Raet1cO08604 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Raet1cO08604 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Raet1cO08604 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Raet1cO08604 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Raet1cO08604 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Raet1cO08604 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Raet1cO08604 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raet1cO08604 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Raet1cO08604 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raet1cO08604 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Raet1cO08604 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Raet1cO08604 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Raet1cO08604 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Raet1cO08604 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Raet1cO08604 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Raet1cO08604 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Raet1cO08604 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.91■□□□□ 0.62
Raet1cO08604 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Raet1cO08604 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Raet1cO08604 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Raet1cO08604 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms