Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ptchd4B9EKX1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptchd4B9EKX1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptchd4B9EKX1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptchd4B9EKX1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptchd4B9EKX1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptchd4B9EKX1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptchd4B9EKX1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ptchd4B9EKX1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptchd4B9EKX1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptchd4B9EKX1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.11■■□□□ 1.29
Ptchd4B9EKX1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ptchd4B9EKX1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptchd4B9EKX1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.11■■□□□ 1.29
Ptchd4B9EKX1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Ptchd4B9EKX1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Ptchd4B9EKX1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.1■■□□□ 1.29
Ptchd4B9EKX1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.1■■□□□ 1.29
Ptchd4B9EKX1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptchd4B9EKX1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptchd4B9EKX1 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.09■■□□□ 1.29
Ptchd4B9EKX1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptchd4B9EKX1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptchd4B9EKX1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ptchd4B9EKX1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ptchd4B9EKX1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.08■■□□□ 1.29
Ptchd4B9EKX1 Gm21956-201ENSMUST00000179946 522 ntBASIC23.08■■□□□ 1.29
Ptchd4B9EKX1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptchd4B9EKX1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptchd4B9EKX1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ptchd4B9EKX1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptchd4B9EKX1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptchd4B9EKX1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptchd4B9EKX1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ptchd4B9EKX1 Gm12922-201ENSMUST00000120626 809 ntBASIC23.07■■□□□ 1.28
Ptchd4B9EKX1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ptchd4B9EKX1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.07■■□□□ 1.28
Ptchd4B9EKX1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.07■■□□□ 1.28
Ptchd4B9EKX1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptchd4B9EKX1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ptchd4B9EKX1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptchd4B9EKX1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Ptchd4B9EKX1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Ptchd4B9EKX1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptchd4B9EKX1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptchd4B9EKX1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ptchd4B9EKX1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptchd4B9EKX1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ptchd4B9EKX1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Ptchd4B9EKX1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC23.05■■□□□ 1.28
Ptchd4B9EKX1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.05■■□□□ 1.28
Ptchd4B9EKX1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptchd4B9EKX1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ptchd4B9EKX1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptchd4B9EKX1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ptchd4B9EKX1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptchd4B9EKX1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ptchd4B9EKX1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.04■■□□□ 1.28
Ptchd4B9EKX1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Ptchd4B9EKX1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ptchd4B9EKX1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.03■■□□□ 1.28
Ptchd4B9EKX1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ptchd4B9EKX1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ptchd4B9EKX1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
Ptchd4B9EKX1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptchd4B9EKX1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptchd4B9EKX1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
Ptchd4B9EKX1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptchd4B9EKX1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptchd4B9EKX1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ptchd4B9EKX1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptchd4B9EKX1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptchd4B9EKX1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptchd4B9EKX1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.01■■□□□ 1.27
Ptchd4B9EKX1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.01■■□□□ 1.27
Ptchd4B9EKX1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ptchd4B9EKX1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Ptchd4B9EKX1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ptchd4B9EKX1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23■■□□□ 1.27
Ptchd4B9EKX1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Ptchd4B9EKX1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ptchd4B9EKX1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ptchd4B9EKX1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23■■□□□ 1.27
Ptchd4B9EKX1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23■■□□□ 1.27
Ptchd4B9EKX1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
Ptchd4B9EKX1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Ptchd4B9EKX1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Ptchd4B9EKX1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptchd4B9EKX1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptchd4B9EKX1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptchd4B9EKX1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.99■■□□□ 1.27
Ptchd4B9EKX1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ptchd4B9EKX1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptchd4B9EKX1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptchd4B9EKX1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Ptchd4B9EKX1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Ptchd4B9EKX1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptchd4B9EKX1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ptchd4B9EKX1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Ptchd4B9EKX1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms