Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IsxA1A546 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IsxA1A546 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IsxA1A546 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IsxA1A546 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IsxA1A546 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IsxA1A546 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IsxA1A546 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
IsxA1A546 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IsxA1A546 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
IsxA1A546 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IsxA1A546 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IsxA1A546 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IsxA1A546 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
IsxA1A546 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IsxA1A546 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.75■□□□□ 0.75
IsxA1A546 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IsxA1A546 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
IsxA1A546 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IsxA1A546 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IsxA1A546 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IsxA1A546 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.74■□□□□ 0.75
IsxA1A546 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IsxA1A546 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IsxA1A546 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IsxA1A546 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IsxA1A546 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IsxA1A546 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IsxA1A546 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IsxA1A546 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IsxA1A546 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
IsxA1A546 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IsxA1A546 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IsxA1A546 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
IsxA1A546 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
IsxA1A546 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IsxA1A546 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
IsxA1A546 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
IsxA1A546 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
IsxA1A546 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
IsxA1A546 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IsxA1A546 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IsxA1A546 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IsxA1A546 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.71■□□□□ 0.75
IsxA1A546 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
IsxA1A546 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.71■□□□□ 0.75
IsxA1A546 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IsxA1A546 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
IsxA1A546 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IsxA1A546 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.7■□□□□ 0.74
IsxA1A546 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
IsxA1A546 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
IsxA1A546 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IsxA1A546 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IsxA1A546 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IsxA1A546 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
IsxA1A546 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
IsxA1A546 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
IsxA1A546 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IsxA1A546 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IsxA1A546 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IsxA1A546 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
IsxA1A546 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IsxA1A546 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
IsxA1A546 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
IsxA1A546 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
IsxA1A546 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IsxA1A546 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IsxA1A546 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IsxA1A546 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
IsxA1A546 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IsxA1A546 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IsxA1A546 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IsxA1A546 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IsxA1A546 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.66■□□□□ 0.74
IsxA1A546 Gm7432-201ENSMUST00000210343 879 ntBASIC19.66■□□□□ 0.74
IsxA1A546 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IsxA1A546 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IsxA1A546 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.66■□□□□ 0.74
IsxA1A546 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IsxA1A546 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
IsxA1A546 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IsxA1A546 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
IsxA1A546 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IsxA1A546 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IsxA1A546 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IsxA1A546 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IsxA1A546 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IsxA1A546 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IsxA1A546 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
IsxA1A546 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
IsxA1A546 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IsxA1A546 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.64■□□□□ 0.73
IsxA1A546 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
IsxA1A546 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IsxA1A546 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
IsxA1A546 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IsxA1A546 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IsxA1A546 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
IsxA1A546 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms