Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Trav12-1A0N8R1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12-1A0N8R1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12-1A0N8R1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12-1A0N8R1 Gm9806-201ENSMUST00000051080 552 ntBASIC17.79■□□□□ 0.44
Trav12-1A0N8R1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12-1A0N8R1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12-1A0N8R1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12-1A0N8R1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12-1A0N8R1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12-1A0N8R1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12-1A0N8R1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav12-1A0N8R1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12-1A0N8R1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trav12-1A0N8R1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav12-1A0N8R1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav12-1A0N8R1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav12-1A0N8R1 Scarna2-201ENSMUST00000157560 414 ntBASIC17.77■□□□□ 0.44
Trav12-1A0N8R1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav12-1A0N8R1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav12-1A0N8R1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.77■□□□□ 0.43
Trav12-1A0N8R1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav12-1A0N8R1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trav12-1A0N8R1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav12-1A0N8R1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.76■□□□□ 0.43
Trav12-1A0N8R1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav12-1A0N8R1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav12-1A0N8R1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav12-1A0N8R1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Gm16437-201ENSMUST00000025669 507 ntBASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12-1A0N8R1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.74■□□□□ 0.43
Trav12-1A0N8R1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12-1A0N8R1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12-1A0N8R1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12-1A0N8R1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav12-1A0N8R1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav12-1A0N8R1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav12-1A0N8R1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12-1A0N8R1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12-1A0N8R1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12-1A0N8R1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav12-1A0N8R1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav12-1A0N8R1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav12-1A0N8R1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav12-1A0N8R1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.72■□□□□ 0.43
Trav12-1A0N8R1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav12-1A0N8R1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav12-1A0N8R1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav12-1A0N8R1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav12-1A0N8R1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Trav12-1A0N8R1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav12-1A0N8R1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
Trav12-1A0N8R1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav12-1A0N8R1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav12-1A0N8R1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Trav12-1A0N8R1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trav12-1A0N8R1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav12-1A0N8R1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav12-1A0N8R1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav12-1A0N8R1 Gm11687-201ENSMUST00000118911 886 ntBASIC17.7■□□□□ 0.42
Trav12-1A0N8R1 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.7■□□□□ 0.42
Trav12-1A0N8R1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav12-1A0N8R1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav12-1A0N8R1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.7■□□□□ 0.42
Trav12-1A0N8R1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav12-1A0N8R1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.69■□□□□ 0.42
Trav12-1A0N8R1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-1A0N8R1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-1A0N8R1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-1A0N8R1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-1A0N8R1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-1A0N8R1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-1A0N8R1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-1A0N8R1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-1A0N8R1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms