Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Gm3854A0A1B0GSS6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.48■■□□□ 1.03
Gm3854A0A1B0GSS6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm3854A0A1B0GSS6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm3854A0A1B0GSS6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm3854A0A1B0GSS6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm3854A0A1B0GSS6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm3854A0A1B0GSS6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm3854A0A1B0GSS6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm3854A0A1B0GSS6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Gm3854A0A1B0GSS6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Gm3854A0A1B0GSS6 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.47■■□□□ 1.03
Gm3854A0A1B0GSS6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.47■■□□□ 1.03
Gm3854A0A1B0GSS6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm3854A0A1B0GSS6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm3854A0A1B0GSS6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.46■■□□□ 1.03
Gm3854A0A1B0GSS6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.46■■□□□ 1.03
Gm3854A0A1B0GSS6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.46■■□□□ 1.03
Gm3854A0A1B0GSS6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.46■■□□□ 1.03
Gm3854A0A1B0GSS6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm3854A0A1B0GSS6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.46■■□□□ 1.03
Gm3854A0A1B0GSS6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm3854A0A1B0GSS6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm3854A0A1B0GSS6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.45■■□□□ 1.02
Gm3854A0A1B0GSS6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gm3854A0A1B0GSS6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Gm3854A0A1B0GSS6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm3854A0A1B0GSS6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm3854A0A1B0GSS6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm3854A0A1B0GSS6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.44■■□□□ 1.02
Gm3854A0A1B0GSS6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm3854A0A1B0GSS6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm3854A0A1B0GSS6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Gm3854A0A1B0GSS6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm3854A0A1B0GSS6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.43■■□□□ 1.02
Gm3854A0A1B0GSS6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm3854A0A1B0GSS6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
Gm3854A0A1B0GSS6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm3854A0A1B0GSS6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm3854A0A1B0GSS6 Gm12821-201ENSMUST00000120022 600 ntBASIC21.42■■□□□ 1.02
Gm3854A0A1B0GSS6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm3854A0A1B0GSS6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Gm3854A0A1B0GSS6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Gm3854A0A1B0GSS6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm3854A0A1B0GSS6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm3854A0A1B0GSS6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm3854A0A1B0GSS6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm3854A0A1B0GSS6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm3854A0A1B0GSS6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Gm3854A0A1B0GSS6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.41■■□□□ 1.02
Gm3854A0A1B0GSS6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm3854A0A1B0GSS6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Gm3854A0A1B0GSS6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm3854A0A1B0GSS6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.4■■□□□ 1.02
Gm3854A0A1B0GSS6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gm3854A0A1B0GSS6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.4■■□□□ 1.02
Gm3854A0A1B0GSS6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.4■■□□□ 1.02
Gm3854A0A1B0GSS6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
Gm3854A0A1B0GSS6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm3854A0A1B0GSS6 Golgb1-201ENSMUST00000023534 498 ntBASIC21.39■■□□□ 1.01
Gm3854A0A1B0GSS6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm3854A0A1B0GSS6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.39■■□□□ 1.01
Gm3854A0A1B0GSS6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Gm3854A0A1B0GSS6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.39■■□□□ 1.01
Gm3854A0A1B0GSS6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm3854A0A1B0GSS6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm3854A0A1B0GSS6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.38■■□□□ 1.01
Gm3854A0A1B0GSS6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.38■■□□□ 1.01
Gm3854A0A1B0GSS6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Gm3854A0A1B0GSS6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gm3854A0A1B0GSS6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm3854A0A1B0GSS6 Gm27454-201ENSMUST00000185090 204 ntBASIC21.37■■□□□ 1.01
Gm3854A0A1B0GSS6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.37■■□□□ 1.01
Gm3854A0A1B0GSS6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm3854A0A1B0GSS6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm3854A0A1B0GSS6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.36■■□□□ 1.01
Gm3854A0A1B0GSS6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm3854A0A1B0GSS6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Gm3854A0A1B0GSS6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gm3854A0A1B0GSS6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm3854A0A1B0GSS6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Gm3854A0A1B0GSS6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm3854A0A1B0GSS6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm3854A0A1B0GSS6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
Gm3854A0A1B0GSS6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm3854A0A1B0GSS6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm3854A0A1B0GSS6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm3854A0A1B0GSS6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.34■■□□□ 1.01
Gm3854A0A1B0GSS6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm3854A0A1B0GSS6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.34■■□□□ 1.01
Gm3854A0A1B0GSS6 Gm45417-201ENSMUST00000209533 758 ntBASIC21.34■■□□□ 1.01
Gm3854A0A1B0GSS6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm3854A0A1B0GSS6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm3854A0A1B0GSS6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm3854A0A1B0GSS6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm3854A0A1B0GSS6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm3854A0A1B0GSS6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm3854A0A1B0GSS6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm3854A0A1B0GSS6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm3854A0A1B0GSS6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms