Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Slc6a21A0A1B0GSD2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Slc6a21A0A1B0GSD2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.48■■□□□ 1.35
Slc6a21A0A1B0GSD2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Slc6a21A0A1B0GSD2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.48■■□□□ 1.35
Slc6a21A0A1B0GSD2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Slc6a21A0A1B0GSD2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Slc6a21A0A1B0GSD2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Slc6a21A0A1B0GSD2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.47■■□□□ 1.35
Slc6a21A0A1B0GSD2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Slc6a21A0A1B0GSD2 Gm45417-201ENSMUST00000209533 758 ntBASIC23.47■■□□□ 1.35
Slc6a21A0A1B0GSD2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Slc6a21A0A1B0GSD2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Slc6a21A0A1B0GSD2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Slc6a21A0A1B0GSD2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Slc6a21A0A1B0GSD2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Slc6a21A0A1B0GSD2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Slc6a21A0A1B0GSD2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Slc6a21A0A1B0GSD2 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.45■■□□□ 1.35
Slc6a21A0A1B0GSD2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.45■■□□□ 1.34
Slc6a21A0A1B0GSD2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.45■■□□□ 1.34
Slc6a21A0A1B0GSD2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.45■■□□□ 1.34
Slc6a21A0A1B0GSD2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Slc6a21A0A1B0GSD2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Slc6a21A0A1B0GSD2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Slc6a21A0A1B0GSD2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Slc6a21A0A1B0GSD2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.44■■□□□ 1.34
Slc6a21A0A1B0GSD2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Slc6a21A0A1B0GSD2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Slc6a21A0A1B0GSD2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Slc6a21A0A1B0GSD2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Slc6a21A0A1B0GSD2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Slc6a21A0A1B0GSD2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Slc6a21A0A1B0GSD2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Slc6a21A0A1B0GSD2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Slc6a21A0A1B0GSD2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Slc6a21A0A1B0GSD2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.41■■□□□ 1.34
Slc6a21A0A1B0GSD2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Slc6a21A0A1B0GSD2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Slc6a21A0A1B0GSD2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Slc6a21A0A1B0GSD2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.41■■□□□ 1.34
Slc6a21A0A1B0GSD2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Slc6a21A0A1B0GSD2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Slc6a21A0A1B0GSD2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.4■■□□□ 1.34
Slc6a21A0A1B0GSD2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Slc6a21A0A1B0GSD2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.4■■□□□ 1.34
Slc6a21A0A1B0GSD2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Slc6a21A0A1B0GSD2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Slc6a21A0A1B0GSD2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Slc6a21A0A1B0GSD2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Slc6a21A0A1B0GSD2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Slc6a21A0A1B0GSD2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.39■■□□□ 1.33
Slc6a21A0A1B0GSD2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Slc6a21A0A1B0GSD2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Slc6a21A0A1B0GSD2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Slc6a21A0A1B0GSD2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.39■■□□□ 1.33
Slc6a21A0A1B0GSD2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Slc6a21A0A1B0GSD2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Slc6a21A0A1B0GSD2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Slc6a21A0A1B0GSD2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Slc6a21A0A1B0GSD2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Slc6a21A0A1B0GSD2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.37■■□□□ 1.33
Slc6a21A0A1B0GSD2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Slc6a21A0A1B0GSD2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Slc6a21A0A1B0GSD2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Slc6a21A0A1B0GSD2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.36■■□□□ 1.33
Slc6a21A0A1B0GSD2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Slc6a21A0A1B0GSD2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Slc6a21A0A1B0GSD2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Slc6a21A0A1B0GSD2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Slc6a21A0A1B0GSD2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Slc6a21A0A1B0GSD2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.35■■□□□ 1.33
Slc6a21A0A1B0GSD2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc6a21A0A1B0GSD2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Slc6a21A0A1B0GSD2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc6a21A0A1B0GSD2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc6a21A0A1B0GSD2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc6a21A0A1B0GSD2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc6a21A0A1B0GSD2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.33■■□□□ 1.33
Slc6a21A0A1B0GSD2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Slc6a21A0A1B0GSD2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slc6a21A0A1B0GSD2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.33■■□□□ 1.33
Slc6a21A0A1B0GSD2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slc6a21A0A1B0GSD2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Slc6a21A0A1B0GSD2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.33■■□□□ 1.33
Slc6a21A0A1B0GSD2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Slc6a21A0A1B0GSD2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Slc6a21A0A1B0GSD2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slc6a21A0A1B0GSD2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slc6a21A0A1B0GSD2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slc6a21A0A1B0GSD2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Slc6a21A0A1B0GSD2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slc6a21A0A1B0GSD2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Slc6a21A0A1B0GSD2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc6a21A0A1B0GSD2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Slc6a21A0A1B0GSD2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.31■■□□□ 1.32
Slc6a21A0A1B0GSD2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Slc6a21A0A1B0GSD2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc6a21A0A1B0GSD2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc6a21A0A1B0GSD2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms