Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm3880A0A1B0GSB3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm3880A0A1B0GSB3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Gm3880A0A1B0GSB3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm3880A0A1B0GSB3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm3880A0A1B0GSB3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm3880A0A1B0GSB3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Gm3880A0A1B0GSB3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Gm3880A0A1B0GSB3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC10.68□□□□□ -0.7
Gm3880A0A1B0GSB3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm3880A0A1B0GSB3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC10.67□□□□□ -0.7
Gm3880A0A1B0GSB3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm3880A0A1B0GSB3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm3880A0A1B0GSB3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm3880A0A1B0GSB3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm3880A0A1B0GSB3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Gm3880A0A1B0GSB3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm3880A0A1B0GSB3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm3880A0A1B0GSB3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm3880A0A1B0GSB3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Gm3880A0A1B0GSB3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm3880A0A1B0GSB3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm3880A0A1B0GSB3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm3880A0A1B0GSB3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC10.66□□□□□ -0.7
Gm3880A0A1B0GSB3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm3880A0A1B0GSB3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm3880A0A1B0GSB3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm3880A0A1B0GSB3 Gm4430-201ENSMUST00000192413 1943 ntBASIC10.66□□□□□ -0.7
Gm3880A0A1B0GSB3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Gm3880A0A1B0GSB3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm3880A0A1B0GSB3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Gm37415-201ENSMUST00000192265 2054 ntBASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Gm8093-201ENSMUST00000128935 1892 ntBASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Gm3880A0A1B0GSB3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Gm3880A0A1B0GSB3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm3880A0A1B0GSB3 Gm15043-201ENSMUST00000118843 1543 ntBASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm3880A0A1B0GSB3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms