Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgb8A0A140LI48 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgb8A0A140LI48 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdhgb8A0A140LI48 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.09■□□□□ 0.65
Pcdhgb8A0A140LI48 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb8A0A140LI48 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb8A0A140LI48 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhgb8A0A140LI48 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgb8A0A140LI48 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb8A0A140LI48 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb8A0A140LI48 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb8A0A140LI48 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb8A0A140LI48 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhgb8A0A140LI48 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhgb8A0A140LI48 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhgb8A0A140LI48 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb8A0A140LI48 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb8A0A140LI48 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb8A0A140LI48 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.06■□□□□ 0.64
Pcdhgb8A0A140LI48 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.06■□□□□ 0.64
Pcdhgb8A0A140LI48 Gm10420-201ENSMUST00000121713 882 ntBASIC19.06■□□□□ 0.64
Pcdhgb8A0A140LI48 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb8A0A140LI48 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdhgb8A0A140LI48 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb8A0A140LI48 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.06■□□□□ 0.64
Pcdhgb8A0A140LI48 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb8A0A140LI48 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhgb8A0A140LI48 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb8A0A140LI48 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb8A0A140LI48 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb8A0A140LI48 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb8A0A140LI48 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb8A0A140LI48 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb8A0A140LI48 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb8A0A140LI48 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb8A0A140LI48 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.04■□□□□ 0.64
Pcdhgb8A0A140LI48 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb8A0A140LI48 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.04■□□□□ 0.64
Pcdhgb8A0A140LI48 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.04■□□□□ 0.64
Pcdhgb8A0A140LI48 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgb8A0A140LI48 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb8A0A140LI48 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb8A0A140LI48 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb8A0A140LI48 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb8A0A140LI48 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb8A0A140LI48 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb8A0A140LI48 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.03■□□□□ 0.64
Pcdhgb8A0A140LI48 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdhgb8A0A140LI48 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb8A0A140LI48 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Pcdhgb8A0A140LI48 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pcdhgb8A0A140LI48 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb8A0A140LI48 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb8A0A140LI48 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb8A0A140LI48 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Pcdhgb8A0A140LI48 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgb8A0A140LI48 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgb8A0A140LI48 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb8A0A140LI48 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb8A0A140LI48 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb8A0A140LI48 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.01■□□□□ 0.63
Pcdhgb8A0A140LI48 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pcdhgb8A0A140LI48 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.01■□□□□ 0.63
Pcdhgb8A0A140LI48 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb8A0A140LI48 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhgb8A0A140LI48 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb8A0A140LI48 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb8A0A140LI48 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhgb8A0A140LI48 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb8A0A140LI48 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19■□□□□ 0.63
Pcdhgb8A0A140LI48 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb8A0A140LI48 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb8A0A140LI48 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb8A0A140LI48 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb8A0A140LI48 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb8A0A140LI48 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhgb8A0A140LI48 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb8A0A140LI48 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb8A0A140LI48 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb8A0A140LI48 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb8A0A140LI48 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb8A0A140LI48 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb8A0A140LI48 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb8A0A140LI48 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb8A0A140LI48 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb8A0A140LI48 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb8A0A140LI48 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms