Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC46.38■■■■■ 5.01
Gm35339A0A140LHH9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC46.37■■■■■ 5.01
Gm35339A0A140LHH9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC46.37■■■■■ 5.01
Gm35339A0A140LHH9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC46.36■■■■■ 5.01
Gm35339A0A140LHH9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC46.36■■■■■ 5.01
Gm35339A0A140LHH9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC46.35■■■■■ 5.01
Gm35339A0A140LHH9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC46.35■■■■■ 5.01
Gm35339A0A140LHH9 AC164629.5-201ENSMUST00000220387 632 ntBASIC46.35■■■■■ 5.01
Gm35339A0A140LHH9 Gm29257-201ENSMUST00000186115 639 ntBASIC46.34■■■■■ 5.01
Gm35339A0A140LHH9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC46.34■■■■■ 5.01
Gm35339A0A140LHH9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC46.34■■■■■ 5.01
Gm35339A0A140LHH9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC46.33■■■■■ 5.01
Gm35339A0A140LHH9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC46.33■■■■■ 5.01
Gm35339A0A140LHH9 Gm43017-201ENSMUST00000198296 752 ntBASIC46.33■■■■■ 5.01
Gm35339A0A140LHH9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC46.33■■■■■ 5.01
Gm35339A0A140LHH9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC46.32■■■■■ 5.01
Gm35339A0A140LHH9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC46.32■■■■■ 5.01
Gm35339A0A140LHH9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC46.32■■■■■ 5.01
Gm35339A0A140LHH9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC46.32■■■■■ 5.01
Gm35339A0A140LHH9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC46.32■■■■■ 5
Gm35339A0A140LHH9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC46.32■■■■■ 5
Gm35339A0A140LHH9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC46.31■■■■■ 5
Gm35339A0A140LHH9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC46.31■■■■■ 5
Gm35339A0A140LHH9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC46.3■■■■■ 5
Gm35339A0A140LHH9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC46.29■■■■■ 5
Gm35339A0A140LHH9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC46.29■■■■■ 5
Gm35339A0A140LHH9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC46.28■■■■■ 5
Gm35339A0A140LHH9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC46.28■■■■■ 5
Gm35339A0A140LHH9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC46.27■■■■■ 5
Gm35339A0A140LHH9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC46.27■■■■■ 5
Gm35339A0A140LHH9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC46.26■■■■■ 5
Gm35339A0A140LHH9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC46.26■■■■■ 5
Gm35339A0A140LHH9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC46.25■■■■■ 5
Gm35339A0A140LHH9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC46.25■■■■■ 4.99
Gm35339A0A140LHH9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC46.25■■■■■ 4.99
Gm35339A0A140LHH9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC46.24■■■■■ 4.99
Gm35339A0A140LHH9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC46.24■■■■■ 4.99
Gm35339A0A140LHH9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC46.24■■■■■ 4.99
Gm35339A0A140LHH9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC46.23■■■■■ 4.99
Gm35339A0A140LHH9 Gm21168-201ENSMUST00000199646 1096 ntBASIC46.23■■■■■ 4.99
Gm35339A0A140LHH9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC46.22■■■■■ 4.99
Gm35339A0A140LHH9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC46.22■■■■■ 4.99
Gm35339A0A140LHH9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC46.22■■■■■ 4.99
Gm35339A0A140LHH9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC46.22■■■■■ 4.99
Gm35339A0A140LHH9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC46.22■■■■■ 4.99
Gm35339A0A140LHH9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC46.22■■■■■ 4.99
Gm35339A0A140LHH9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC46.22■■■■■ 4.99
Gm35339A0A140LHH9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC46.21■■■■■ 4.99
Gm35339A0A140LHH9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC46.2■■■■■ 4.99
Gm35339A0A140LHH9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC46.2■■■■■ 4.99
Gm35339A0A140LHH9 Gm9207-201ENSMUST00000198773 1115 ntBASIC46.18■■■■■ 4.98
Gm35339A0A140LHH9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC46.18■■■■■ 4.98
Gm35339A0A140LHH9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC46.18■■■■■ 4.98
Gm35339A0A140LHH9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC46.18■■■■■ 4.98
Gm35339A0A140LHH9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC46.17■■■■■ 4.98
Gm35339A0A140LHH9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC46.17■■■■■ 4.98
Gm35339A0A140LHH9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC46.17■■■■■ 4.98
Gm35339A0A140LHH9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC46.17■■■■■ 4.98
Gm35339A0A140LHH9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC46.16■■■■■ 4.98
Gm35339A0A140LHH9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC46.16■■■■■ 4.98
Gm35339A0A140LHH9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC46.16■■■■■ 4.98
Gm35339A0A140LHH9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC46.16■■■■■ 4.98
Gm35339A0A140LHH9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC46.16■■■■■ 4.98
Gm35339A0A140LHH9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC46.16■■■■■ 4.98
Gm35339A0A140LHH9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC46.15■■■■■ 4.98
Gm35339A0A140LHH9 Gm12251-201ENSMUST00000117893 792 ntBASIC46.15■■■■■ 4.98
Gm35339A0A140LHH9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC46.15■■■■■ 4.98
Gm35339A0A140LHH9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC46.15■■■■■ 4.98
Gm35339A0A140LHH9 Gm42699-201ENSMUST00000198104 1657 ntBASIC46.14■■■■■ 4.98
Gm35339A0A140LHH9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC46.14■■■■■ 4.98
Gm35339A0A140LHH9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC46.14■■■■■ 4.98
Gm35339A0A140LHH9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC46.13■■■■■ 4.98
Gm35339A0A140LHH9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC46.13■■■■■ 4.98
Gm35339A0A140LHH9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC46.13■■■■■ 4.97
Gm35339A0A140LHH9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC46.12■■■■■ 4.97
Gm35339A0A140LHH9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC46.11■■■■■ 4.97
Gm35339A0A140LHH9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC46.11■■■■■ 4.97
Gm35339A0A140LHH9 Gm43137-201ENSMUST00000198052 594 ntBASIC46.11■■■■■ 4.97
Gm35339A0A140LHH9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC46.1■■■■■ 4.97
Gm35339A0A140LHH9 Gm43173-201ENSMUST00000202246 593 ntBASIC46.1■■■■■ 4.97
Gm35339A0A140LHH9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC46.1■■■■■ 4.97
Gm35339A0A140LHH9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC46.09■■■■■ 4.97
Gm35339A0A140LHH9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC46.08■■■■■ 4.97
Gm35339A0A140LHH9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC46.08■■■■■ 4.97
Gm35339A0A140LHH9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC46.08■■■■■ 4.97
Gm35339A0A140LHH9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC46.07■■■■■ 4.97
Gm35339A0A140LHH9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC46.07■■■■■ 4.97
Gm35339A0A140LHH9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC46.07■■■■■ 4.97
Gm35339A0A140LHH9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC46.07■■■■■ 4.97
Gm35339A0A140LHH9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC46.07■■■■■ 4.97
Gm35339A0A140LHH9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC46.07■■■■■ 4.96
Gm35339A0A140LHH9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC46.06■■■■■ 4.96
Gm35339A0A140LHH9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC46.05■■■■■ 4.96
Gm35339A0A140LHH9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC46.04■■■■■ 4.96
Gm35339A0A140LHH9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC46.04■■■■■ 4.96
Gm35339A0A140LHH9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC46.04■■■■■ 4.96
Gm35339A0A140LHH9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC46.03■■■■■ 4.96
Gm35339A0A140LHH9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC46.03■■■■■ 4.96
Gm35339A0A140LHH9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC46.03■■■■■ 4.96
Gm35339A0A140LHH9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC46.03■■■■■ 4.96
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms