Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.58□□□□□ -0.08
Trav11A0A0B4J1J9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.58□□□□□ -0.08
Trav11A0A0B4J1J9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav11A0A0B4J1J9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav11A0A0B4J1J9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav11A0A0B4J1J9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav11A0A0B4J1J9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trav11A0A0B4J1J9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav11A0A0B4J1J9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav11A0A0B4J1J9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav11A0A0B4J1J9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav11A0A0B4J1J9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav11A0A0B4J1J9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav11A0A0B4J1J9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trav11A0A0B4J1J9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav11A0A0B4J1J9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav11A0A0B4J1J9 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.56□□□□□ -0.08
Trav11A0A0B4J1J9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav11A0A0B4J1J9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav11A0A0B4J1J9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav11A0A0B4J1J9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav11A0A0B4J1J9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav11A0A0B4J1J9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav11A0A0B4J1J9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav11A0A0B4J1J9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav11A0A0B4J1J9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav11A0A0B4J1J9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav11A0A0B4J1J9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav11A0A0B4J1J9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav11A0A0B4J1J9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav11A0A0B4J1J9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav11A0A0B4J1J9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav11A0A0B4J1J9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav11A0A0B4J1J9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav11A0A0B4J1J9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav11A0A0B4J1J9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav11A0A0B4J1J9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.54□□□□□ -0.08
Trav11A0A0B4J1J9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav11A0A0B4J1J9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav11A0A0B4J1J9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav11A0A0B4J1J9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav11A0A0B4J1J9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav11A0A0B4J1J9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav11A0A0B4J1J9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav11A0A0B4J1J9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav11A0A0B4J1J9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav11A0A0B4J1J9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav11A0A0B4J1J9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav11A0A0B4J1J9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav11A0A0B4J1J9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav11A0A0B4J1J9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav11A0A0B4J1J9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav11A0A0B4J1J9 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.52□□□□□ -0.09
Trav11A0A0B4J1J9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav11A0A0B4J1J9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav11A0A0B4J1J9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Gm8503-201ENSMUST00000118131 455 ntBASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Gm45364-201ENSMUST00000210883 159 ntBASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav11A0A0B4J1J9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav11A0A0B4J1J9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav11A0A0B4J1J9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav11A0A0B4J1J9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trav11A0A0B4J1J9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav11A0A0B4J1J9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav11A0A0B4J1J9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav11A0A0B4J1J9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav11A0A0B4J1J9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav11A0A0B4J1J9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav11A0A0B4J1J9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav11A0A0B4J1J9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav11A0A0B4J1J9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav11A0A0B4J1J9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav11A0A0B4J1J9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav11A0A0B4J1J9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.49□□□□□ -0.09
Trav11A0A0B4J1J9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms