Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-20A0A0A6YX66 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-20A0A0A6YX66 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-20A0A0A6YX66 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-20A0A0A6YX66 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.23■□□□□ 0.35
Ighv1-20A0A0A6YX66 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.23■□□□□ 0.35
Ighv1-20A0A0A6YX66 Gm9959-201ENSMUST00000068277 390 ntBASIC17.23■□□□□ 0.35
Ighv1-20A0A0A6YX66 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ighv1-20A0A0A6YX66 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-20A0A0A6YX66 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-20A0A0A6YX66 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ighv1-20A0A0A6YX66 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-20A0A0A6YX66 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-20A0A0A6YX66 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-20A0A0A6YX66 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-20A0A0A6YX66 Gm14117-201ENSMUST00000122417 843 ntBASIC17.22■□□□□ 0.35
Ighv1-20A0A0A6YX66 Etf1-202ENSMUST00000180351 108 ntBASIC17.22■□□□□ 0.35
Ighv1-20A0A0A6YX66 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.22■□□□□ 0.35
Ighv1-20A0A0A6YX66 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-20A0A0A6YX66 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-20A0A0A6YX66 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.22■□□□□ 0.35
Ighv1-20A0A0A6YX66 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ighv1-20A0A0A6YX66 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-20A0A0A6YX66 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-20A0A0A6YX66 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-20A0A0A6YX66 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ighv1-20A0A0A6YX66 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-20A0A0A6YX66 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-20A0A0A6YX66 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-20A0A0A6YX66 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-20A0A0A6YX66 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-20A0A0A6YX66 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ighv1-20A0A0A6YX66 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-20A0A0A6YX66 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-20A0A0A6YX66 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv1-20A0A0A6YX66 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-20A0A0A6YX66 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-20A0A0A6YX66 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.2■□□□□ 0.34
Ighv1-20A0A0A6YX66 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ighv1-20A0A0A6YX66 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-20A0A0A6YX66 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.2■□□□□ 0.34
Ighv1-20A0A0A6YX66 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.2■□□□□ 0.34
Ighv1-20A0A0A6YX66 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-20A0A0A6YX66 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-20A0A0A6YX66 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-20A0A0A6YX66 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.19■□□□□ 0.34
Ighv1-20A0A0A6YX66 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-20A0A0A6YX66 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.19■□□□□ 0.34
Ighv1-20A0A0A6YX66 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ighv1-20A0A0A6YX66 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-20A0A0A6YX66 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-20A0A0A6YX66 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-20A0A0A6YX66 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-20A0A0A6YX66 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv1-20A0A0A6YX66 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.18■□□□□ 0.34
Ighv1-20A0A0A6YX66 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv1-20A0A0A6YX66 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-20A0A0A6YX66 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-20A0A0A6YX66 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.17■□□□□ 0.34
Ighv1-20A0A0A6YX66 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-20A0A0A6YX66 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-20A0A0A6YX66 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.17■□□□□ 0.34
Ighv1-20A0A0A6YX66 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 Gm7417-201ENSMUST00000192950 473 ntBASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 Gm10399-202ENSMUST00000202768 748 ntBASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-20A0A0A6YX66 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-20A0A0A6YX66 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-20A0A0A6YX66 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.15■□□□□ 0.34
Ighv1-20A0A0A6YX66 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ighv1-20A0A0A6YX66 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.15■□□□□ 0.34
Ighv1-20A0A0A6YX66 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-20A0A0A6YX66 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ighv1-20A0A0A6YX66 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ighv1-20A0A0A6YX66 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-20A0A0A6YX66 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.14■□□□□ 0.33
Ighv1-20A0A0A6YX66 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.14■□□□□ 0.33
Ighv1-20A0A0A6YX66 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-20A0A0A6YX66 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ighv1-20A0A0A6YX66 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-20A0A0A6YX66 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-20A0A0A6YX66 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-20A0A0A6YX66 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv1-20A0A0A6YX66 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-20A0A0A6YX66 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv1-20A0A0A6YX66 Gm40881-201ENSMUST00000223397 166 ntBASIC17.13■□□□□ 0.33
Ighv1-20A0A0A6YX66 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-20A0A0A6YX66 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ighv1-20A0A0A6YX66 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-20A0A0A6YX66 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms