Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trbc1A0A0A6YWV4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbc1A0A0A6YWV4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbc1A0A0A6YWV4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trbc1A0A0A6YWV4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbc1A0A0A6YWV4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbc1A0A0A6YWV4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.55■□□□□ 0.72
Trbc1A0A0A6YWV4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbc1A0A0A6YWV4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trbc1A0A0A6YWV4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbc1A0A0A6YWV4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trbc1A0A0A6YWV4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trbc1A0A0A6YWV4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.54■□□□□ 0.72
Trbc1A0A0A6YWV4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbc1A0A0A6YWV4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Trbc1A0A0A6YWV4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trbc1A0A0A6YWV4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbc1A0A0A6YWV4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbc1A0A0A6YWV4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbc1A0A0A6YWV4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trbc1A0A0A6YWV4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.53■□□□□ 0.72
Trbc1A0A0A6YWV4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trbc1A0A0A6YWV4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trbc1A0A0A6YWV4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbc1A0A0A6YWV4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbc1A0A0A6YWV4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.52■□□□□ 0.72
Trbc1A0A0A6YWV4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Trbc1A0A0A6YWV4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Trbc1A0A0A6YWV4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trbc1A0A0A6YWV4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trbc1A0A0A6YWV4 Gm13238-201ENSMUST00000117655 780 ntBASIC19.51■□□□□ 0.71
Trbc1A0A0A6YWV4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.51■□□□□ 0.71
Trbc1A0A0A6YWV4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trbc1A0A0A6YWV4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.51■□□□□ 0.71
Trbc1A0A0A6YWV4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbc1A0A0A6YWV4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbc1A0A0A6YWV4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.51■□□□□ 0.71
Trbc1A0A0A6YWV4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbc1A0A0A6YWV4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Trbc1A0A0A6YWV4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbc1A0A0A6YWV4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbc1A0A0A6YWV4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbc1A0A0A6YWV4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trbc1A0A0A6YWV4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trbc1A0A0A6YWV4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trbc1A0A0A6YWV4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbc1A0A0A6YWV4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trbc1A0A0A6YWV4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trbc1A0A0A6YWV4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Trbc1A0A0A6YWV4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbc1A0A0A6YWV4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbc1A0A0A6YWV4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trbc1A0A0A6YWV4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbc1A0A0A6YWV4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trbc1A0A0A6YWV4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbc1A0A0A6YWV4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trbc1A0A0A6YWV4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.48■□□□□ 0.71
Trbc1A0A0A6YWV4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbc1A0A0A6YWV4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbc1A0A0A6YWV4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbc1A0A0A6YWV4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbc1A0A0A6YWV4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbc1A0A0A6YWV4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbc1A0A0A6YWV4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trbc1A0A0A6YWV4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trbc1A0A0A6YWV4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.47■□□□□ 0.71
Trbc1A0A0A6YWV4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbc1A0A0A6YWV4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbc1A0A0A6YWV4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trbc1A0A0A6YWV4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trbc1A0A0A6YWV4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbc1A0A0A6YWV4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbc1A0A0A6YWV4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trbc1A0A0A6YWV4 Gm5812-201ENSMUST00000061073 957 ntBASIC19.46■□□□□ 0.71
Trbc1A0A0A6YWV4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbc1A0A0A6YWV4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbc1A0A0A6YWV4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Trbc1A0A0A6YWV4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbc1A0A0A6YWV4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trbc1A0A0A6YWV4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trbc1A0A0A6YWV4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trbc1A0A0A6YWV4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trbc1A0A0A6YWV4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbc1A0A0A6YWV4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbc1A0A0A6YWV4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
Trbc1A0A0A6YWV4 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.44■□□□□ 0.7
Trbc1A0A0A6YWV4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trbc1A0A0A6YWV4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbc1A0A0A6YWV4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbc1A0A0A6YWV4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbc1A0A0A6YWV4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trbc1A0A0A6YWV4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbc1A0A0A6YWV4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.43■□□□□ 0.7
Trbc1A0A0A6YWV4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbc1A0A0A6YWV4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trbc1A0A0A6YWV4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.43■□□□□ 0.7
Trbc1A0A0A6YWV4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbc1A0A0A6YWV4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbc1A0A0A6YWV4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Trbc1A0A0A6YWV4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms