Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav4-2A0A075B638 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4-2A0A075B638 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4-2A0A075B638 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav4-2A0A075B638 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.89■□□□□ 0.29
Trav4-2A0A075B638 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav4-2A0A075B638 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Trav4-2A0A075B638 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.88■□□□□ 0.29
Trav4-2A0A075B638 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4-2A0A075B638 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4-2A0A075B638 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4-2A0A075B638 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav4-2A0A075B638 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav4-2A0A075B638 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav4-2A0A075B638 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav4-2A0A075B638 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav4-2A0A075B638 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.87■□□□□ 0.29
Trav4-2A0A075B638 Gm4799-201ENSMUST00000095396 657 ntBASIC16.87■□□□□ 0.29
Trav4-2A0A075B638 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav4-2A0A075B638 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav4-2A0A075B638 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav4-2A0A075B638 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4-2A0A075B638 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4-2A0A075B638 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4-2A0A075B638 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4-2A0A075B638 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.86■□□□□ 0.29
Trav4-2A0A075B638 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4-2A0A075B638 Terc-201ENSMUST00000082862 423 ntBASIC16.86■□□□□ 0.29
Trav4-2A0A075B638 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.86■□□□□ 0.29
Trav4-2A0A075B638 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav4-2A0A075B638 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Trav4-2A0A075B638 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav4-2A0A075B638 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav4-2A0A075B638 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav4-2A0A075B638 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-2A0A075B638 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav4-2A0A075B638 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-2A0A075B638 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-2A0A075B638 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-2A0A075B638 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-2A0A075B638 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-2A0A075B638 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-2A0A075B638 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav4-2A0A075B638 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav4-2A0A075B638 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.82■□□□□ 0.28
Trav4-2A0A075B638 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.82■□□□□ 0.28
Trav4-2A0A075B638 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4-2A0A075B638 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4-2A0A075B638 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4-2A0A075B638 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4-2A0A075B638 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav4-2A0A075B638 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav4-2A0A075B638 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4-2A0A075B638 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav4-2A0A075B638 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4-2A0A075B638 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav4-2A0A075B638 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav4-2A0A075B638 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav4-2A0A075B638 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav4-2A0A075B638 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav4-2A0A075B638 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav4-2A0A075B638 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav4-2A0A075B638 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav4-2A0A075B638 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.8■□□□□ 0.28
Trav4-2A0A075B638 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav4-2A0A075B638 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav4-2A0A075B638 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4-2A0A075B638 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4-2A0A075B638 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav4-2A0A075B638 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms