Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4n-4A0A075B615 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4n-4A0A075B615 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav4n-4A0A075B615 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trav4n-4A0A075B615 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4n-4A0A075B615 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4n-4A0A075B615 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4n-4A0A075B615 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav4n-4A0A075B615 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4n-4A0A075B615 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4n-4A0A075B615 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4n-4A0A075B615 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4n-4A0A075B615 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4n-4A0A075B615 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Trav4n-4A0A075B615 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4n-4A0A075B615 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4n-4A0A075B615 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav4n-4A0A075B615 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav4n-4A0A075B615 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4n-4A0A075B615 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav4n-4A0A075B615 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4n-4A0A075B615 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4n-4A0A075B615 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4n-4A0A075B615 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4n-4A0A075B615 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4n-4A0A075B615 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4n-4A0A075B615 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4n-4A0A075B615 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav4n-4A0A075B615 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4n-4A0A075B615 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4n-4A0A075B615 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4n-4A0A075B615 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4n-4A0A075B615 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4n-4A0A075B615 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav4n-4A0A075B615 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4n-4A0A075B615 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav4n-4A0A075B615 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav4n-4A0A075B615 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav4n-4A0A075B615 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4n-4A0A075B615 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav4n-4A0A075B615 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav4n-4A0A075B615 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4n-4A0A075B615 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav4n-4A0A075B615 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4n-4A0A075B615 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4n-4A0A075B615 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4n-4A0A075B615 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav4n-4A0A075B615 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav4n-4A0A075B615 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav4n-4A0A075B615 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav4n-4A0A075B615 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav4n-4A0A075B615 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav4n-4A0A075B615 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4n-4A0A075B615 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4n-4A0A075B615 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4n-4A0A075B615 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav4n-4A0A075B615 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav4n-4A0A075B615 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.73□□□□□ -0.05
Trav4n-4A0A075B615 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4n-4A0A075B615 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4n-4A0A075B615 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4n-4A0A075B615 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav4n-4A0A075B615 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4n-4A0A075B615 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4n-4A0A075B615 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4n-4A0A075B615 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4n-4A0A075B615 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav4n-4A0A075B615 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4n-4A0A075B615 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4n-4A0A075B615 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav4n-4A0A075B615 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4n-4A0A075B615 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4n-4A0A075B615 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4n-4A0A075B615 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4n-4A0A075B615 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4n-4A0A075B615 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav4n-4A0A075B615 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4n-4A0A075B615 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav4n-4A0A075B615 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4n-4A0A075B615 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav4n-4A0A075B615 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4n-4A0A075B615 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4n-4A0A075B615 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4n-4A0A075B615 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4n-4A0A075B615 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav4n-4A0A075B615 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms