Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.89■□□□□ 0.77
Trav1A0A075B5Z4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Trav1A0A075B5Z4 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.89■□□□□ 0.77
Trav1A0A075B5Z4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trav1A0A075B5Z4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav1A0A075B5Z4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav1A0A075B5Z4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav1A0A075B5Z4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trav1A0A075B5Z4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav1A0A075B5Z4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trav1A0A075B5Z4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav1A0A075B5Z4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav1A0A075B5Z4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav1A0A075B5Z4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav1A0A075B5Z4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav1A0A075B5Z4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav1A0A075B5Z4 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.87■□□□□ 0.77
Trav1A0A075B5Z4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Trav1A0A075B5Z4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav1A0A075B5Z4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav1A0A075B5Z4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav1A0A075B5Z4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Trav1A0A075B5Z4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav1A0A075B5Z4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Trav1A0A075B5Z4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav1A0A075B5Z4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav1A0A075B5Z4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.86■□□□□ 0.77
Trav1A0A075B5Z4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trav1A0A075B5Z4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav1A0A075B5Z4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav1A0A075B5Z4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav1A0A075B5Z4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.85■□□□□ 0.77
Trav1A0A075B5Z4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.85■□□□□ 0.77
Trav1A0A075B5Z4 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.85■□□□□ 0.77
Trav1A0A075B5Z4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav1A0A075B5Z4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav1A0A075B5Z4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav1A0A075B5Z4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Trav1A0A075B5Z4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trav1A0A075B5Z4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav1A0A075B5Z4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.84■□□□□ 0.77
Trav1A0A075B5Z4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav1A0A075B5Z4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav1A0A075B5Z4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav1A0A075B5Z4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav1A0A075B5Z4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav1A0A075B5Z4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.83■□□□□ 0.77
Trav1A0A075B5Z4 Gm12366-201ENSMUST00000121722 873 ntBASIC19.83■□□□□ 0.77
Trav1A0A075B5Z4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.83■□□□□ 0.77
Trav1A0A075B5Z4 Mir6538-201ENSMUST00000183713 110 ntBASIC19.83■□□□□ 0.77
Trav1A0A075B5Z4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav1A0A075B5Z4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Trav1A0A075B5Z4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.83■□□□□ 0.77
Trav1A0A075B5Z4 Gm5786-201ENSMUST00000085368 882 ntBASIC19.83■□□□□ 0.77
Trav1A0A075B5Z4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav1A0A075B5Z4 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.83■□□□□ 0.76
Trav1A0A075B5Z4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav1A0A075B5Z4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav1A0A075B5Z4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav1A0A075B5Z4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.82■□□□□ 0.76
Trav1A0A075B5Z4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.82■□□□□ 0.76
Trav1A0A075B5Z4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.82■□□□□ 0.76
Trav1A0A075B5Z4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav1A0A075B5Z4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav1A0A075B5Z4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Trav1A0A075B5Z4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trav1A0A075B5Z4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav1A0A075B5Z4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trav1A0A075B5Z4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav1A0A075B5Z4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav1A0A075B5Z4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.8■□□□□ 0.76
Trav1A0A075B5Z4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.8■□□□□ 0.76
Trav1A0A075B5Z4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav1A0A075B5Z4 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.8■□□□□ 0.76
Trav1A0A075B5Z4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav1A0A075B5Z4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav1A0A075B5Z4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.79■□□□□ 0.76
Trav1A0A075B5Z4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav1A0A075B5Z4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav1A0A075B5Z4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav1A0A075B5Z4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav1A0A075B5Z4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav1A0A075B5Z4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav1A0A075B5Z4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trav1A0A075B5Z4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav1A0A075B5Z4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav1A0A075B5Z4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav1A0A075B5Z4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav1A0A075B5Z4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav1A0A075B5Z4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trav1A0A075B5Z4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav1A0A075B5Z4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav1A0A075B5Z4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav1A0A075B5Z4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav1A0A075B5Z4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav1A0A075B5Z4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trav1A0A075B5Z4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav1A0A075B5Z4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav1A0A075B5Z4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.76■□□□□ 0.75
Trav1A0A075B5Z4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms