Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Gm25948-201ENSMUST00000175334 112 ntBASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Gm27772-201ENSMUST00000184900 187 ntBASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Gm43474-201ENSMUST00000196415 774 ntBASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Gm15240-201ENSMUST00000118156 720 ntBASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Gm25911-201ENSMUST00000157621 56 ntBASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Gm44335-201ENSMUST00000196879 141 ntBASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Gm44297-201ENSMUST00000198304 141 ntBASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Gm44346-201ENSMUST00000198851 141 ntBASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk1bQ9Z2C6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk1bQ9Z2C6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms