Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Gm38144-201ENSMUST00000192790 465 ntBASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Gm42550-201ENSMUST00000201553 960 ntBASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClcnkaQ9WUB7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Mir7654-201ENSMUST00000185082 70 ntBASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClcnkaQ9WUB7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClcnkaQ9WUB7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms