Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk3aQ9JKX8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Gm29705-201ENSMUST00000212598 474 ntBASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk3aQ9JKX8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Gm12390-201ENSMUST00000117897 397 ntBASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Gm29127-201ENSMUST00000188304 517 ntBASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Upk3aQ9JKX8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Upk3aQ9JKX8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3aQ9JKX8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.66□□□□□ -0.38
Upk3aQ9JKX8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3aQ9JKX8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3aQ9JKX8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3aQ9JKX8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3aQ9JKX8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Upk3aQ9JKX8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms