Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Gm27572-201ENSMUST00000183702 255 ntBASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.66■□□□□ 0.1
Ube3bQ9ES34 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube3bQ9ES34 Gm45251-201ENSMUST00000209486 1465 ntBASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Gm16379-201ENSMUST00000161469 348 ntBASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Gm22121-201ENSMUST00000175148 54 ntBASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Gm38002-201ENSMUST00000193255 180 ntBASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Gm8762-201ENSMUST00000193486 339 ntBASIC15.65■□□□□ 0.1
Ube3bQ9ES34 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Gm32025-201ENSMUST00000217960 307 ntBASIC15.65■□□□□ 0.1
Ube3bQ9ES34 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube3bQ9ES34 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Ube3bQ9ES34 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
Ube3bQ9ES34 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Ube3bQ9ES34 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Gm45880-201ENSMUST00000213041 853 ntBASIC15.64■□□□□ 0.09
Ube3bQ9ES34 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.64■□□□□ 0.09
Ube3bQ9ES34 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.64■□□□□ 0.09
Ube3bQ9ES34 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms