Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Gm45433-201ENSMUST00000209386 247 ntBASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Daam2-202ENSMUST00000224595 1926 ntBASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-4Q9EQM3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.46□□□□□ -0.25
Nkx2-4Q9EQM3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-4Q9EQM3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-4Q9EQM3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
Nkx2-4Q9EQM3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Nkx2-4Q9EQM3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Nkx2-4Q9EQM3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-4Q9EQM3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-4Q9EQM3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-4Q9EQM3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Nkx2-4Q9EQM3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Gm9062-201ENSMUST00000117712 727 ntBASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Gm13296-201ENSMUST00000117854 997 ntBASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Gm15131-201ENSMUST00000119124 595 ntBASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Gm14704-201ENSMUST00000120300 874 ntBASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Gm11597-201ENSMUST00000121423 964 ntBASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Gm24749-201ENSMUST00000157838 343 ntBASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Gm7003-201ENSMUST00000195089 312 ntBASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-4Q9EQM3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms