Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Mir125a-201ENSMUST00000083545 68 ntBASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgn3Q9DCB1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Gm17271-201ENSMUST00000165535 355 ntBASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgn3Q9DCB1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Gm11779-201ENSMUST00000118541 368 ntBASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Gm11025-201ENSMUST00000140773 466 ntBASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms