Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpne8Q9DC53 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.76□□□□□ -0.21
Cpne8Q9DC53 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpne8Q9DC53 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cpne8Q9DC53 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpne8Q9DC53 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.76□□□□□ -0.21
Cpne8Q9DC53 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpne8Q9DC53 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpne8Q9DC53 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Gm27437-201ENSMUST00000183429 107 ntBASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Mir7654-201ENSMUST00000185082 70 ntBASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Gm18624-201ENSMUST00000220966 658 ntBASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
Cpne8Q9DC53 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Gm14350-201ENSMUST00000116642 640 ntBASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Gm38223-201ENSMUST00000194484 695 ntBASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Gm18307-201ENSMUST00000206864 949 ntBASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpne8Q9DC53 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Gm7488-201ENSMUST00000117148 684 ntBASIC13.73□□□□□ -0.21
Cpne8Q9DC53 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Gm37917-201ENSMUST00000194711 392 ntBASIC13.73□□□□□ -0.21
Cpne8Q9DC53 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms