Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Gm14127-201ENSMUST00000117906 678 ntBASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Gm37922-201ENSMUST00000195596 455 ntBASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Gm45841-201ENSMUST00000207700 164 ntBASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ssmem1Q9D9Y8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Gm12203-201ENSMUST00000118235 598 ntBASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Gm12209-201ENSMUST00000120089 596 ntBASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Gm18062-201ENSMUST00000208020 547 ntBASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Gm18055-201ENSMUST00000208254 547 ntBASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ssmem1Q9D9Y8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ssmem1Q9D9Y8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ssmem1Q9D9Y8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ssmem1Q9D9Y8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Ssmem1Q9D9Y8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.39□□□□□ -0.59
Ssmem1Q9D9Y8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms