Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
U2af1Q9D883 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
U2af1Q9D883 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
U2af1Q9D883 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
U2af1Q9D883 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
U2af1Q9D883 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
U2af1Q9D883 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
U2af1Q9D883 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
U2af1Q9D883 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
U2af1Q9D883 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC17.33■□□□□ 0.37
U2af1Q9D883 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
U2af1Q9D883 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
U2af1Q9D883 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
U2af1Q9D883 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.33■□□□□ 0.36
U2af1Q9D883 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
U2af1Q9D883 Gm16479-201ENSMUST00000121706 932 ntBASIC17.33■□□□□ 0.36
U2af1Q9D883 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.33■□□□□ 0.36
U2af1Q9D883 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.33■□□□□ 0.36
U2af1Q9D883 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2af1Q9D883 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
U2af1Q9D883 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2af1Q9D883 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
U2af1Q9D883 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
U2af1Q9D883 AC122314.1-201ENSMUST00000223056 2239 ntBASIC17.33■□□□□ 0.36
U2af1Q9D883 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
U2af1Q9D883 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2af1Q9D883 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
U2af1Q9D883 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2af1Q9D883 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2af1Q9D883 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
U2af1Q9D883 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2af1Q9D883 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
U2af1Q9D883 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
U2af1Q9D883 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
U2af1Q9D883 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC17.32■□□□□ 0.36
U2af1Q9D883 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC17.32■□□□□ 0.36
U2af1Q9D883 Gm23931-201ENSMUST00000103842 109 ntBASIC17.32■□□□□ 0.36
U2af1Q9D883 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Gm12742-201ENSMUST00000117326 410 ntBASIC17.32■□□□□ 0.36
U2af1Q9D883 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC17.32■□□□□ 0.36
U2af1Q9D883 Gm2231-201ENSMUST00000125661 612 ntBASIC17.32■□□□□ 0.36
U2af1Q9D883 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Gm37424-201ENSMUST00000191727 561 ntBASIC17.32■□□□□ 0.36
U2af1Q9D883 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.32■□□□□ 0.36
U2af1Q9D883 AC135669.1-202ENSMUST00000216742 540 ntBASIC17.32■□□□□ 0.36
U2af1Q9D883 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
U2af1Q9D883 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
U2af1Q9D883 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
U2af1Q9D883 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2af1Q9D883 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2af1Q9D883 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2af1Q9D883 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC17.31■□□□□ 0.36
U2af1Q9D883 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC17.31■□□□□ 0.36
U2af1Q9D883 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2af1Q9D883 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
U2af1Q9D883 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
U2af1Q9D883 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2af1Q9D883 Gm12539-201ENSMUST00000121549 1098 ntBASIC17.31■□□□□ 0.36
U2af1Q9D883 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
U2af1Q9D883 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC17.31■□□□□ 0.36
U2af1Q9D883 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC17.31■□□□□ 0.36
U2af1Q9D883 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
U2af1Q9D883 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.31■□□□□ 0.36
U2af1Q9D883 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.31■□□□□ 0.36
U2af1Q9D883 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2af1Q9D883 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2af1Q9D883 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2af1Q9D883 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2af1Q9D883 Gm44065-201ENSMUST00000203184 3527 ntBASIC17.31■□□□□ 0.36
U2af1Q9D883 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
U2af1Q9D883 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
U2af1Q9D883 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.31■□□□□ 0.36
U2af1Q9D883 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
U2af1Q9D883 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.3■□□□□ 0.36
U2af1Q9D883 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.3■□□□□ 0.36
U2af1Q9D883 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
U2af1Q9D883 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
U2af1Q9D883 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms