Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm3404Q9D506 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Gm3404Q9D506 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm3404Q9D506 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm3404Q9D506 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm3404Q9D506 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Gm3404Q9D506 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm3404Q9D506 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gm3404Q9D506 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm3404Q9D506 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.01□□□□□ -0.17
Gm3404Q9D506 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Gm8602-201ENSMUST00000184045 607 ntBASIC14.01□□□□□ -0.17
Gm3404Q9D506 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gm3404Q9D506 Gm8131-201ENSMUST00000213783 1570 ntBASIC14□□□□□ -0.17
Gm3404Q9D506 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Gm3404Q9D506 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14□□□□□ -0.17
Gm3404Q9D506 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Gm3404Q9D506 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gm3404Q9D506 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14□□□□□ -0.17
Gm3404Q9D506 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14□□□□□ -0.17
Gm3404Q9D506 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14□□□□□ -0.17
Gm3404Q9D506 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14□□□□□ -0.17
Gm3404Q9D506 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Gm44799-201ENSMUST00000207639 1202 ntBASIC14□□□□□ -0.17
Gm3404Q9D506 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Gm3404Q9D506 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14□□□□□ -0.17
Gm3404Q9D506 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gm3404Q9D506 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm3404Q9D506 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14□□□□□ -0.17
Gm3404Q9D506 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Gm14350-201ENSMUST00000116642 640 ntBASIC13.99□□□□□ -0.17
Gm3404Q9D506 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.99□□□□□ -0.17
Gm3404Q9D506 Gm27486-201ENSMUST00000184923 80 ntBASIC13.99□□□□□ -0.17
Gm3404Q9D506 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms