Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Gm5566-201ENSMUST00000116118 459 ntBASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Gm8749-201ENSMUST00000117737 331 ntBASIC8.79□□□□□ -1
Mrpl55Q9CZ83 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Gm5866-201ENSMUST00000177881 973 ntBASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Gm29541-201ENSMUST00000191351 678 ntBASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Gm5035-201ENSMUST00000215581 927 ntBASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Wdyhv1-206ENSMUST00000227142 786 ntBASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Mrpl55Q9CZ83 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Gm27437-201ENSMUST00000183429 107 ntBASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Gm27306-201ENSMUST00000183970 107 ntBASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Gm38294-201ENSMUST00000192831 381 ntBASIC8.78□□□□□ -1
Mrpl55Q9CZ83 AC125206.2-201ENSMUST00000217454 574 ntBASIC8.78□□□□□ -1
Mrpl55Q9CZ83 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Rbfox2-208ENSMUST00000227930 1218 ntBASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC8.78□□□□□ -1
Mrpl55Q9CZ83 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms