Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm16202-201ENSMUST00000117532 544 ntBASIC12.52□□□□□ -0.41
Otud1Q9CUB6 AY702102-202ENSMUST00000194651 1173 ntBASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Gm44069-201ENSMUST00000204898 506 ntBASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.52□□□□□ -0.41
Otud1Q9CUB6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.52□□□□□ -0.41
Otud1Q9CUB6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Gm12957-201ENSMUST00000117835 377 ntBASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Gm8805-201ENSMUST00000117848 313 ntBASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Gm37922-201ENSMUST00000195596 455 ntBASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Gm10146-201ENSMUST00000072739 309 ntBASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otud1Q9CUB6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Gm4271-201ENSMUST00000174444 973 ntBASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.5□□□□□ -0.41
Otud1Q9CUB6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Gm43818-201ENSMUST00000200605 466 ntBASIC12.5□□□□□ -0.41
Otud1Q9CUB6 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 AC140209.1-201ENSMUST00000227875 284 ntBASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Gm16372-201ENSMUST00000073088 450 ntBASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otud1Q9CUB6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms