Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Gm13996-201ENSMUST00000118456 430 ntBASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Gm13492-201ENSMUST00000119772 665 ntBASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Gm9550-201ENSMUST00000161130 862 ntBASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Gm7467-201ENSMUST00000185173 652 ntBASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Daam2-202ENSMUST00000224595 1926 ntBASIC13.43□□□□□ -0.26
Cldnd1Q9CQX5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cldnd1Q9CQX5 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Gm12058-201ENSMUST00000118614 437 ntBASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cldnd1Q9CQX5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms